Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Foxp3-203ENSMUST00000115739 3739 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NcanP55066 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NcanP55066 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NcanP55066 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 4930402H05Rik-201ENSMUST00000203115 2829 ntBASIC8.27□□□□□ -1.09
NcanP55066 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NcanP55066 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
NcanP55066 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Olfr601-202ENSMUST00000210431 2266 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
NcanP55066 Oca2-201ENSMUST00000032633 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NcanP55066 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Ces3a-202ENSMUST00000093223 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC8.27□□□□□ -1.09
NcanP55066 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Cntrob-201ENSMUST00000092973 3861 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Mbnl3-201ENSMUST00000041495 1803 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NcanP55066 1700024J04Rik-201ENSMUST00000093146 1821 ntBASIC8.26□□□□□ -1.09
NcanP55066 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
NcanP55066 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
NcanP55066 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
NcanP55066 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NcanP55066 Unc45b-201ENSMUST00000018989 3549 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
NcanP55066 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NcanP55066 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
NcanP55066 Gm13921-201ENSMUST00000119411 463 ntBASIC8.26□□□□□ -1.09
NcanP55066 Gm11955-201ENSMUST00000119801 470 ntBASIC8.26□□□□□ -1.09
NcanP55066 Gm12983-201ENSMUST00000120974 310 ntBASIC8.26□□□□□ -1.09
NcanP55066 Gm13586-201ENSMUST00000121784 464 ntBASIC8.26□□□□□ -1.09
NcanP55066 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NcanP55066 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.26□□□□□ -1.09
NcanP55066 Gm25692-201ENSMUST00000175444 125 ntBASIC8.26□□□□□ -1.09
NcanP55066 Gm17786-201ENSMUST00000182000 427 ntBASIC8.26□□□□□ -1.09
NcanP55066 Gm21614-201ENSMUST00000183260 1005 ntBASIC8.26□□□□□ -1.09
NcanP55066 Gm27218-201ENSMUST00000183745 392 ntBASIC8.26□□□□□ -1.09
NcanP55066 Gm7115-201ENSMUST00000193706 832 ntBASIC8.26□□□□□ -1.09
NcanP55066 Gm43840-201ENSMUST00000199444 484 ntBASIC8.26□□□□□ -1.09
NcanP55066 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NcanP55066 Lrp1b-212ENSMUST00000204204 798 ntTSL 2 BASIC8.26□□□□□ -1.09
NcanP55066 Gm44760-201ENSMUST00000206375 1173 ntBASIC8.26□□□□□ -1.09
NcanP55066 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NcanP55066 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.26□□□□□ -1.09
NcanP55066 Gm45690-201ENSMUST00000210775 246 ntBASIC8.26□□□□□ -1.09
NcanP55066 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC8.26□□□□□ -1.09
NcanP55066 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC8.26□□□□□ -1.09
NcanP55066 AC125543.2-201ENSMUST00000222114 105 ntBASIC8.26□□□□□ -1.09
NcanP55066 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC8.26□□□□□ -1.09
NcanP55066 CT030170.7-201ENSMUST00000223372 103 ntBASIC8.26□□□□□ -1.09
NcanP55066 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
NcanP55066 Olfr237-ps1-202ENSMUST00000215911 4220 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
NcanP55066 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NcanP55066 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NcanP55066 Gm18957-201ENSMUST00000197623 1813 ntBASIC8.26□□□□□ -1.09
NcanP55066 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NcanP55066 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
NcanP55066 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
NcanP55066 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NcanP55066 Il6st-209ENSMUST00000184445 1870 ntTSL 5 BASIC8.26□□□□□ -1.09
NcanP55066 Gm43910-201ENSMUST00000204561 3241 ntBASIC8.25□□□□□ -1.09
NcanP55066 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 AC165260.6-204ENSMUST00000225571 3508 ntBASIC8.25□□□□□ -1.09
NcanP55066 Pnmal1-201ENSMUST00000038163 4090 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Gm44280-201ENSMUST00000204498 3111 ntBASIC8.25□□□□□ -1.09
NcanP55066 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Sept2-213ENSMUST00000168776 3267 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
NcanP55066 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
NcanP55066 Bdnf-206ENSMUST00000111046 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Pard3b-203ENSMUST00000094906 7676 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
NcanP55066 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
NcanP55066 D830032E09Rik-203ENSMUST00000189845 2092 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Fut10-203ENSMUST00000161502 3527 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Slco1b2-204ENSMUST00000203597 1965 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
NcanP55066 Gm22781-201ENSMUST00000104083 137 ntBASIC8.25□□□□□ -1.09
NcanP55066 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Gm13423-201ENSMUST00000117205 888 ntBASIC8.25□□□□□ -1.09
NcanP55066 Gm11928-201ENSMUST00000119323 437 ntBASIC8.25□□□□□ -1.09
NcanP55066 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Gm22529-201ENSMUST00000158817 123 ntBASIC8.25□□□□□ -1.09
NcanP55066 U2af1l4-205ENSMUST00000163482 668 ntTSL 5 BASIC8.25□□□□□ -1.09
NcanP55066 Gm22701-201ENSMUST00000175371 291 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms