Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Abi2-210ENSMUST00000189980 4115 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Col18a1P39061 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm4279-201ENSMUST00000154314 2329 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 AC187103.1-201ENSMUST00000224641 1475 ntBASIC10.05□□□□□ -0.8
Col18a1P39061 Tnfaip1-202ENSMUST00000108277 3768 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Napg-201ENSMUST00000025474 3562 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Col18a1P39061 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm12955-201ENSMUST00000119689 957 ntBASIC10.05□□□□□ -0.8
Col18a1P39061 Gm12593-201ENSMUST00000120981 743 ntBASIC10.05□□□□□ -0.8
Col18a1P39061 Gm25318-201ENSMUST00000122554 314 ntBASIC10.05□□□□□ -0.8
Col18a1P39061 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm9285-201ENSMUST00000177691 697 ntBASIC10.05□□□□□ -0.8
Col18a1P39061 Mir6973b-201ENSMUST00000184185 80 ntBASIC10.05□□□□□ -0.8
Col18a1P39061 Gm43836-201ENSMUST00000196532 381 ntBASIC10.05□□□□□ -0.8
Col18a1P39061 Gm42634-201ENSMUST00000197362 381 ntBASIC10.05□□□□□ -0.8
Col18a1P39061 Gm43459-201ENSMUST00000202093 331 ntBASIC10.05□□□□□ -0.8
Col18a1P39061 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Col18a1P39061 Kcna4-201ENSMUST00000037012 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC10.05□□□□□ -0.8
Col18a1P39061 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC10.05□□□□□ -0.8
Col18a1P39061 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col18a1P39061 Olfr718-ps1-201ENSMUST00000164536 3962 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
Col18a1P39061 Gm18726-201ENSMUST00000218175 2010 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC10.04□□□□□ -0.8
Col18a1P39061 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC10.04□□□□□ -0.8
Col18a1P39061 Gm14869-201ENSMUST00000119007 884 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC10.04□□□□□ -0.8
Col18a1P39061 Mir7235-201ENSMUST00000183796 56 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28739-201ENSMUST00000185415 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28219-201ENSMUST00000185452 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28542-201ENSMUST00000185545 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28303-201ENSMUST00000185642 747 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29244-201ENSMUST00000185825 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29437-201ENSMUST00000185865 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29412-201ENSMUST00000185869 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28910-201ENSMUST00000185921 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28812-201ENSMUST00000185963 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29468-201ENSMUST00000185978 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28335-201ENSMUST00000186204 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28854-201ENSMUST00000186218 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28636-201ENSMUST00000186353 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28452-201ENSMUST00000186623 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29298-201ENSMUST00000186704 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28185-201ENSMUST00000186815 694 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28227-201ENSMUST00000186862 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28796-201ENSMUST00000186905 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29659-201ENSMUST00000187063 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28473-201ENSMUST00000187325 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28558-201ENSMUST00000187373 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28682-201ENSMUST00000187430 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28738-201ENSMUST00000187480 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28949-201ENSMUST00000187805 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28773-201ENSMUST00000187925 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29319-201ENSMUST00000188060 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29422-201ENSMUST00000188062 694 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28734-201ENSMUST00000188104 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28787-201ENSMUST00000188357 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29312-201ENSMUST00000188724 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29451-201ENSMUST00000188862 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29637-201ENSMUST00000188877 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29033-201ENSMUST00000189114 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29144-201ENSMUST00000189235 339 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29614-201ENSMUST00000189263 694 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28751-201ENSMUST00000189287 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29559-201ENSMUST00000189412 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28272-201ENSMUST00000189512 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28483-201ENSMUST00000189519 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29238-201ENSMUST00000189709 695 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28123-201ENSMUST00000189725 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28368-201ENSMUST00000189804 696 ntBASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms