Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Gm24665-201ENSMUST00000104160 129 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Gm13252-201ENSMUST00000119355 321 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Gm12773-201ENSMUST00000120134 587 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Gm12124-201ENSMUST00000120504 679 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Gm12517-201ENSMUST00000122082 425 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Crem-209ENSMUST00000129435 1160 ntTSL 5 BASIC8.26□□□□□ -1.09
Usp4P35123 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Gm22730-201ENSMUST00000158085 171 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Gm26407-201ENSMUST00000158504 307 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Gm20914-201ENSMUST00000180372 684 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp4P35123 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC8.26□□□□□ -1.09
Usp4P35123 Gm3142-201ENSMUST00000190107 414 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Gm38164-201ENSMUST00000192810 330 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Gm37215-201ENSMUST00000194927 1259 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Gm7482-201ENSMUST00000206446 505 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Gm45475-201ENSMUST00000209381 309 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC8.26□□□□□ -1.09
Usp4P35123 AC192333.4-201ENSMUST00000224269 981 ntBASIC8.26□□□□□ -1.09
Usp4P35123 AC167019.4-201ENSMUST00000226494 1070 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Olfr38-201ENSMUST00000074499 954 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp4P35123 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp4P35123 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Usp4P35123 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp4P35123 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Usp4P35123 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.26□□□□□ -1.09
Usp4P35123 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Usp4P35123 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Trim39-205ENSMUST00000173369 2914 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 AC140280.1-201ENSMUST00000227826 1847 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Slc18b1-201ENSMUST00000119597 2837 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Gm22760-201ENSMUST00000102277 93 ntBASIC8.25□□□□□ -1.09
Usp4P35123 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Gm41-201ENSMUST00000116183 1023 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Gm8802-201ENSMUST00000118633 740 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC8.25□□□□□ -1.09
Usp4P35123 Gm15753-201ENSMUST00000119241 1062 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Gm12170-201ENSMUST00000119281 300 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Gm5392-201ENSMUST00000122189 789 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Usp4P35123 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC8.25□□□□□ -1.09
Usp4P35123 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC8.25□□□□□ -1.09
Usp4P35123 Gm18353-201ENSMUST00000185906 784 ntBASIC8.25□□□□□ -1.09
Usp4P35123 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Gm5575-201ENSMUST00000190879 398 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Gm17979-201ENSMUST00000196646 611 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 1700081B01Rik-202ENSMUST00000197543 648 ntTSL 3 BASIC8.25□□□□□ -1.09
Usp4P35123 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Gm43196-201ENSMUST00000201762 2114 ntBASIC8.25□□□□□ -1.09
Usp4P35123 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Gm5609-201ENSMUST00000210008 1267 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC8.25□□□□□ -1.09
Usp4P35123 AC153968.2-201ENSMUST00000215579 1140 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Gm2649-201ENSMUST00000218825 610 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Gm10451-202ENSMUST00000219367 855 ntTSL 2 BASIC8.25□□□□□ -1.09
Usp4P35123 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC8.25□□□□□ -1.09
Usp4P35123 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC8.25□□□□□ -1.09
Usp4P35123 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms