Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC8.8□□□□□ -1
B020004C17RikJ3QP07 Gm38236-201ENSMUST00000192661 3229 ntBASIC8.8□□□□□ -1
B020004C17RikJ3QP07 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
B020004C17RikJ3QP07 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
B020004C17RikJ3QP07 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
B020004C17RikJ3QP07 Lingo2-204ENSMUST00000108124 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
B020004C17RikJ3QP07 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.8□□□□□ -1
B020004C17RikJ3QP07 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
B020004C17RikJ3QP07 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8.8□□□□□ -1
B020004C17RikJ3QP07 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
B020004C17RikJ3QP07 Gm44509-201ENSMUST00000205400 1324 ntBASIC8.8□□□□□ -1
B020004C17RikJ3QP07 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm42519-201ENSMUST00000199282 3656 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Lage3-203ENSMUST00000114153 1997 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm43323-201ENSMUST00000202328 4258 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Rfpl4-201ENSMUST00000045215 1598 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Snhg7os-202ENSMUST00000131841 3947 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 n-R5s172-201ENSMUST00000104508 114 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm15481-201ENSMUST00000120264 539 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Mir1983-201ENSMUST00000157523 132 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm8046-201ENSMUST00000172151 616 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm26179-201ENSMUST00000177723 132 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm29144-201ENSMUST00000189235 339 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm29238-201ENSMUST00000189709 695 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm28607-201ENSMUST00000190142 339 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm28121-201ENSMUST00000191420 339 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm34144-201ENSMUST00000197039 259 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm21054-201ENSMUST00000203981 380 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 AC101205.1-201ENSMUST00000227916 907 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm13110-201ENSMUST00000138077 3414 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm37995-201ENSMUST00000194958 1714 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Aplnr-201ENSMUST00000057019 3699 ntAPPRIS P1 BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Olfr545-202ENSMUST00000216116 3496 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC8.79□□□□□ -1
B020004C17RikJ3QP07 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Exoc1-203ENSMUST00000113493 3371 ntTSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Gm35172-201ENSMUST00000196037 2649 ntBASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Gm14904-201ENSMUST00000117067 335 ntBASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Gm8215-201ENSMUST00000120627 990 ntBASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Gm12535-201ENSMUST00000121025 484 ntBASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Gm16523-201ENSMUST00000121253 592 ntBASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Gm43287-201ENSMUST00000197747 600 ntBASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Gm34701-201ENSMUST00000204213 849 ntBASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
B020004C17RikJ3QP07 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms