Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm9801-201ENSMUST00000054860 408 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm25852-201ENSMUST00000082790 130 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm5614-201ENSMUST00000091097 318 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Nup88Q8CEC0 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
Nup88Q8CEC0 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC9.15□□□□□ -0.95
Nup88Q8CEC0 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Nup88Q8CEC0 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Nup88Q8CEC0 AC154461.6-201ENSMUST00000224815 2630 ntBASIC9.15□□□□□ -0.95
Nup88Q8CEC0 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Nup88Q8CEC0 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Nup88Q8CEC0 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Smok2b-202ENSMUST00000162940 2306 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm23834-201ENSMUST00000104436 129 ntBASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm14000-201ENSMUST00000118670 233 ntBASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm8304-201ENSMUST00000185744 584 ntBASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm5920-201ENSMUST00000187390 853 ntBASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm43743-201ENSMUST00000197898 697 ntBASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm43560-201ENSMUST00000198100 773 ntBASIC9.14□□□□□ -0.95
Nup88Q8CEC0 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm18378-201ENSMUST00000216245 628 ntBASIC9.14□□□□□ -0.95
Nup88Q8CEC0 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 CT009556.2-201ENSMUST00000227980 1123 ntBASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Olfr890-201ENSMUST00000079804 945 ntBASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Gm13821-201ENSMUST00000202029 3201 ntBASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Nup88Q8CEC0 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm14528-201ENSMUST00000120615 231 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm5931-201ENSMUST00000121308 477 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm11688-201ENSMUST00000122145 308 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm26182-201ENSMUST00000157688 116 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm24362-201ENSMUST00000183220 416 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm27435-201ENSMUST00000183588 88 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm18033-201ENSMUST00000186678 550 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm9451-201ENSMUST00000188491 604 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm9723-201ENSMUST00000192100 457 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Gm6197-201ENSMUST00000192273 454 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nup88Q8CEC0 AC154307.1-201ENSMUST00000214799 90 ntBASIC9.13□□□□□ -0.95
Nup88Q8CEC0 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms