Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Ccdc38Q8CDN8 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ccdc38Q8CDN8 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm38014-201ENSMUST00000193349 2612 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 AC126028.1-201ENSMUST00000226218 2123 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm25780-201ENSMUST00000122528 253 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm24347-201ENSMUST00000158711 142 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm29143-201ENSMUST00000189462 201 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Ighv10-2-201ENSMUST00000195182 298 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm44156-201ENSMUST00000203885 1189 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm45074-201ENSMUST00000209091 1240 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm17875-201ENSMUST00000216005 941 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 AC162940.1-201ENSMUST00000224745 1167 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm25129-201ENSMUST00000082651 133 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Olfr5-201ENSMUST00000086318 1044 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 AC107757.2-201ENSMUST00000226370 1466 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm21051-201ENSMUST00000221757 1688 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm28791-201ENSMUST00000185888 1779 ntBASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc38Q8CDN8 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm23192-201ENSMUST00000102434 96 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm22426-201ENSMUST00000103811 96 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm24472-201ENSMUST00000104484 132 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm8688-201ENSMUST00000118240 969 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm15220-201ENSMUST00000120730 379 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm23094-201ENSMUST00000157551 322 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm37706-201ENSMUST00000195379 2765 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Mir7230-201ENSMUST00000195977 56 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm43873-201ENSMUST00000204505 3938 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 AC154738.3-201ENSMUST00000227953 409 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm20302-201ENSMUST00000080671 275 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm24696-201ENSMUST00000083878 134 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc38Q8CDN8 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms