Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim43aQ3TL54 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim43aQ3TL54 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim43aQ3TL54 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Gm12310-201ENSMUST00000118013 492 ntBASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Gm12955-201ENSMUST00000119689 957 ntBASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Gm24063-201ENSMUST00000157491 105 ntBASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Gm22202-201ENSMUST00000158608 311 ntBASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Gm24362-201ENSMUST00000183220 416 ntBASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Gm7369-201ENSMUST00000192738 936 ntBASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Gm37450-201ENSMUST00000195218 170 ntBASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Gm4178-201ENSMUST00000218307 649 ntBASIC8.21□□□□□ -1.1
Trim43aQ3TL54 AC132468.1-201ENSMUST00000224706 499 ntBASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Gm26132-201ENSMUST00000083166 148 ntBASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim43aQ3TL54 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm15220-201ENSMUST00000120730 379 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm23413-201ENSMUST00000175521 125 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm18353-201ENSMUST00000185906 784 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm29517-201ENSMUST00000190744 351 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Pisrt1-201ENSMUST00000195532 515 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm17977-201ENSMUST00000198743 574 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm16475-202ENSMUST00000209033 528 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm46313-201ENSMUST00000220463 547 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 AC160930.2-201ENSMUST00000226608 303 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.2□□□□□ -1.1
Trim43aQ3TL54 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim43aQ3TL54 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms