Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Msh6P54276 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Msh6P54276 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC9.84□□□□□ -0.83
Msh6P54276 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Msh6P54276 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC9.84□□□□□ -0.83
Msh6P54276 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Msh6P54276 Gm15362-201ENSMUST00000121459 388 ntBASIC9.84□□□□□ -0.83
Msh6P54276 Gm3611-201ENSMUST00000173687 877 ntBASIC9.84□□□□□ -0.83
Msh6P54276 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC9.84□□□□□ -0.83
Msh6P54276 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC9.84□□□□□ -0.83
Msh6P54276 Gm7419-201ENSMUST00000209962 925 ntBASIC9.84□□□□□ -0.83
Msh6P54276 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC9.84□□□□□ -0.83
Msh6P54276 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC9.84□□□□□ -0.83
Msh6P54276 AC133598.3-204ENSMUST00000224260 767 ntBASIC9.84□□□□□ -0.83
Msh6P54276 AC106830.2-201ENSMUST00000226624 943 ntBASIC9.84□□□□□ -0.83
Msh6P54276 AC134414.1-201ENSMUST00000228499 1221 ntBASIC9.84□□□□□ -0.83
Msh6P54276 Glycam1-204ENSMUST00000228895 641 ntBASIC9.84□□□□□ -0.83
Msh6P54276 Gm6887-201ENSMUST00000080945 482 ntBASIC9.84□□□□□ -0.83
Msh6P54276 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Msh6P54276 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Msh6P54276 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Msh6P54276 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Msh6P54276 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC9.83□□□□□ -0.84
Msh6P54276 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Msh6P54276 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC9.83□□□□□ -0.84
Msh6P54276 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Msh6P54276 Gm5135-201ENSMUST00000121100 573 ntBASIC9.83□□□□□ -0.84
Msh6P54276 Gm2619-202ENSMUST00000166777 651 ntBASIC9.83□□□□□ -0.84
Msh6P54276 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC9.83□□□□□ -0.84
Msh6P54276 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC9.83□□□□□ -0.84
Msh6P54276 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Msh6P54276 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC9.83□□□□□ -0.84
Msh6P54276 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC9.83□□□□□ -0.84
Msh6P54276 AC125087.1-201ENSMUST00000227552 514 ntBASIC9.83□□□□□ -0.84
Msh6P54276 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Msh6P54276 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 AC153940.1-201ENSMUST00000220149 5300 ntBASIC9.83□□□□□ -0.84
Msh6P54276 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Msh6P54276 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC9.83□□□□□ -0.84
Msh6P54276 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Msh6P54276 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Msh6P54276 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Msh6P54276 Gm44001-201ENSMUST00000203158 3773 ntBASIC9.82□□□□□ -0.84
Msh6P54276 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Msh6P54276 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Gm38339-201ENSMUST00000195479 1829 ntBASIC9.82□□□□□ -0.84
Msh6P54276 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Gm23701-201ENSMUST00000103893 110 ntBASIC9.82□□□□□ -0.84
Msh6P54276 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Msh6P54276 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Gm11188-201ENSMUST00000122382 388 ntBASIC9.82□□□□□ -0.84
Msh6P54276 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC9.82□□□□□ -0.84
Msh6P54276 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Gm7436-201ENSMUST00000187229 391 ntBASIC9.82□□□□□ -0.84
Msh6P54276 Gm38030-201ENSMUST00000192376 475 ntBASIC9.82□□□□□ -0.84
Msh6P54276 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Gm45446-201ENSMUST00000209348 216 ntBASIC9.82□□□□□ -0.84
Msh6P54276 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Gm18972-201ENSMUST00000218873 630 ntBASIC9.82□□□□□ -0.84
Msh6P54276 AC122539.1-201ENSMUST00000219925 329 ntBASIC9.82□□□□□ -0.84
Msh6P54276 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Msh6P54276 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Msh6P54276 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Msh6P54276 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC9.82□□□□□ -0.84
Msh6P54276 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 117.2 ms