Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Gm13229-201ENSMUST00000118238 340 ntBASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 BC002163-201ENSMUST00000121906 319 ntBASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Gm24883-201ENSMUST00000158391 281 ntBASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Gm4781-201ENSMUST00000167995 781 ntBASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Gm23187-201ENSMUST00000175746 86 ntBASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Gm33778-201ENSMUST00000216884 704 ntBASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 AC154747.4-202ENSMUST00000223826 852 ntBASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Gm26831-201ENSMUST00000181458 1380 ntBASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Upk3aQ9JKX8 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 CT010505.3-201ENSMUST00000227835 1651 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm43254-201ENSMUST00000199187 2491 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm6729-201ENSMUST00000165173 1452 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm44117-201ENSMUST00000204442 1758 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm14509-201ENSMUST00000117312 1286 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm16523-201ENSMUST00000121253 592 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm25437-201ENSMUST00000158282 132 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm22408-201ENSMUST00000174925 65 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm5835-201ENSMUST00000185806 1270 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm37469-201ENSMUST00000193728 890 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 CT572999.1-201ENSMUST00000220315 1260 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 AL590616.1-201ENSMUST00000223339 574 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 CT010480.3-201ENSMUST00000224712 259 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 AC126939.4-201ENSMUST00000225360 743 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 AC131586.4-201ENSMUST00000228424 668 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm5316-201ENSMUST00000050391 270 ntBASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms