Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Raet1d-202ENSMUST00000182677 1425 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm6284-201ENSMUST00000209609 4287 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm21043-201ENSMUST00000199316 1517 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm22150-201ENSMUST00000104447 135 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm12445-201ENSMUST00000117947 885 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm9392-201ENSMUST00000119337 554 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Calm5-201ENSMUST00000183198 589 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm27435-201ENSMUST00000183588 88 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm19080-201ENSMUST00000196082 550 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm45401-201ENSMUST00000209456 733 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 AC153864.1-201ENSMUST00000218482 523 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 AL645704.1-201ENSMUST00000221642 604 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm9761-201ENSMUST00000075650 492 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gm9105-201ENSMUST00000120160 1398 ntBASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc87Q8CDL9 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Xlr5c-202ENSMUST00000114503 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm1982-201ENSMUST00000188615 1887 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm36952-201ENSMUST00000194923 3625 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Defa-ps10-201ENSMUST00000121649 171 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm14830-201ENSMUST00000121899 700 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm22949-201ENSMUST00000158562 105 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm23027-201ENSMUST00000158771 158 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm9729-201ENSMUST00000196364 265 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm34701-201ENSMUST00000204213 849 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm7482-201ENSMUST00000206446 505 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 AC125543.2-201ENSMUST00000222114 105 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 CT030170.7-201ENSMUST00000223372 103 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 AC123058.1-201ENSMUST00000223748 437 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 AC154760.1-201ENSMUST00000227218 673 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm43872-201ENSMUST00000203218 2213 ntBASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Ccdc87Q8CDL9 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms