Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gm6820-201ENSMUST00000188803 2173 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm45832-201ENSMUST00000212762 1443 ntBASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Blvrb-203ENSMUST00000108358 951 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm7910-201ENSMUST00000117896 835 ntBASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm11765-201ENSMUST00000121173 1205 ntBASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm42525-201ENSMUST00000196257 527 ntBASIC8.23□□□□□ -1.09
Trim43aQ3TL54 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm5609-201ENSMUST00000210008 1267 ntBASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC8.23□□□□□ -1.09
Trim43aQ3TL54 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim43aQ3TL54 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Gm44249-201ENSMUST00000204538 1805 ntBASIC8.22□□□□□ -1.09
Trim43aQ3TL54 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Gm12378-201ENSMUST00000116171 1461 ntBASIC8.22□□□□□ -1.09
Trim43aQ3TL54 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Gm11922-201ENSMUST00000118967 475 ntBASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Gm43235-201ENSMUST00000200121 297 ntBASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Gm8489-201ENSMUST00000209876 1152 ntBASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Snora57-201ENSMUST00000093658 148 ntBASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
Trim43aQ3TL54 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim43aQ3TL54 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms