Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC10.11□□□□□ -0.79
Col18a1P39061 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC10.11□□□□□ -0.79
Col18a1P39061 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC10.11□□□□□ -0.79
Col18a1P39061 AC154323.2-201ENSMUST00000226557 1151 ntBASIC10.11□□□□□ -0.79
Col18a1P39061 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC10.11□□□□□ -0.79
Col18a1P39061 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col18a1P39061 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm15681-201ENSMUST00000137501 2704 ntBASIC10.11□□□□□ -0.79
Col18a1P39061 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm43169-201ENSMUST00000199544 4734 ntBASIC10.1□□□□□ -0.79
Col18a1P39061 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Col18a1P39061 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Col18a1P39061 Gm37535-201ENSMUST00000194442 2365 ntBASIC10.1□□□□□ -0.79
Col18a1P39061 Dpp4-201ENSMUST00000047812 5268 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col18a1P39061 Gm37080-201ENSMUST00000194804 2404 ntBASIC10.1□□□□□ -0.79
Col18a1P39061 Pnmal1-201ENSMUST00000038163 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col18a1P39061 Spata31d1b-201ENSMUST00000165133 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col18a1P39061 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC10.1□□□□□ -0.79
Col18a1P39061 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Col18a1P39061 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col18a1P39061 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col18a1P39061 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC10.1□□□□□ -0.79
Col18a1P39061 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col18a1P39061 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC10.1□□□□□ -0.79
Col18a1P39061 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC10.1□□□□□ -0.79
Col18a1P39061 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col18a1P39061 Gm8896-201ENSMUST00000197434 1106 ntBASIC10.1□□□□□ -0.79
Col18a1P39061 Gm2860-201ENSMUST00000199226 707 ntBASIC10.1□□□□□ -0.79
Col18a1P39061 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC10.1□□□□□ -0.79
Col18a1P39061 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col18a1P39061 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Col18a1P39061 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col18a1P39061 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Col18a1P39061 Prrc1-201ENSMUST00000025490 4801 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col18a1P39061 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col18a1P39061 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col18a1P39061 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col18a1P39061 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC10.09□□□□□ -0.79
Col18a1P39061 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC10.09□□□□□ -0.79
Col18a1P39061 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col18a1P39061 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col18a1P39061 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col18a1P39061 Ugt8a-201ENSMUST00000057944 3740 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col18a1P39061 Slco6b1-202ENSMUST00000178359 1778 ntBASIC10.09□□□□□ -0.79
Col18a1P39061 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC10.09□□□□□ -0.79
Col18a1P39061 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC10.09□□□□□ -0.79
Col18a1P39061 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC10.09□□□□□ -0.79
Col18a1P39061 Gm23187-201ENSMUST00000175746 86 ntBASIC10.09□□□□□ -0.79
Col18a1P39061 AC165349.1-201ENSMUST00000217896 424 ntBASIC10.09□□□□□ -0.79
Col18a1P39061 CT025579.4-201ENSMUST00000224598 627 ntBASIC10.09□□□□□ -0.79
Col18a1P39061 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Col18a1P39061 Crtam-201ENSMUST00000034519 1876 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Col18a1P39061 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col18a1P39061 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Col18a1P39061 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Col18a1P39061 Gm12743-201ENSMUST00000126668 3700 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col18a1P39061 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col18a1P39061 Olfr173-202ENSMUST00000206205 2778 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Col18a1P39061 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Col18a1P39061 Nme8-201ENSMUST00000039340 1704 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col18a1P39061 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Col18a1P39061 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col18a1P39061 Itgb2l-202ENSMUST00000113773 2806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col18a1P39061 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col18a1P39061 Gm22267-201ENSMUST00000104008 131 ntBASIC10.09□□□□□ -0.79
Col18a1P39061 Gm13176-201ENSMUST00000117910 477 ntBASIC10.09□□□□□ -0.79
Col18a1P39061 Mir1953-201ENSMUST00000157866 89 ntBASIC10.09□□□□□ -0.79
Col18a1P39061 Gm20614-201ENSMUST00000177106 632 ntBASIC10.09□□□□□ -0.79
Col18a1P39061 Mir7653-201ENSMUST00000184358 61 ntBASIC10.09□□□□□ -0.79
Col18a1P39061 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col18a1P39061 Gm19088-201ENSMUST00000198800 566 ntBASIC10.09□□□□□ -0.79
Col18a1P39061 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC10.09□□□□□ -0.79
Col18a1P39061 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC10.09□□□□□ -0.79
Col18a1P39061 AC105407.1-201ENSMUST00000225684 614 ntBASIC10.09□□□□□ -0.79
Col18a1P39061 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC10.08□□□□□ -0.8
Col18a1P39061 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col18a1P39061 Hdac7-203ENSMUST00000116408 4226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col18a1P39061 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col18a1P39061 Gtf2a1-201ENSMUST00000021345 6064 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col18a1P39061 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC10.08□□□□□ -0.8
Col18a1P39061 Slc11a2-205ENSMUST00000138843 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col18a1P39061 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Col18a1P39061 Gm12661-201ENSMUST00000118780 3335 ntBASIC10.08□□□□□ -0.8
Col18a1P39061 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Col18a1P39061 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col18a1P39061 4930571K23Rik-201ENSMUST00000166958 2153 ntBASIC10.08□□□□□ -0.8
Col18a1P39061 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col18a1P39061 AC155270.1-201ENSMUST00000221626 4028 ntBASIC10.08□□□□□ -0.8
Col18a1P39061 Cdhr2-201ENSMUST00000037145 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col18a1P39061 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Col18a1P39061 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Col18a1P39061 Dock7-201ENSMUST00000030286 7127 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Col18a1P39061 Gm11796-201ENSMUST00000120208 972 ntBASIC10.08□□□□□ -0.8
Col18a1P39061 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC10.08□□□□□ -0.8
Col18a1P39061 Gm14695-201ENSMUST00000121721 282 ntBASIC10.08□□□□□ -0.8
Col18a1P39061 Gm17212-201ENSMUST00000166666 259 ntBASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms