Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Olfr1219-202ENSMUST00000213724 5669 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Helz2-201ENSMUST00000094203 9162 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 BC085271-201ENSMUST00000191852 1487 ntBASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Gm11320-201ENSMUST00000119434 463 ntBASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Gm12955-201ENSMUST00000119689 957 ntBASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Gm14503-201ENSMUST00000130337 1164 ntBASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Mir8105-201ENSMUST00000184718 89 ntBASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Gm37383-201ENSMUST00000191750 745 ntBASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 AC133948.2-201ENSMUST00000217850 378 ntBASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Gm9267-201ENSMUST00000222831 404 ntBASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Prkar2b-203ENSMUST00000146865 3133 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Gm38288-201ENSMUST00000195330 1320 ntBASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 AC061963.2-201ENSMUST00000213541 2739 ntBASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col16a1Q8BLX7 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm38056-201ENSMUST00000193928 5027 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm14863-201ENSMUST00000119648 307 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm26480-201ENSMUST00000122619 297 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm42734-201ENSMUST00000201656 878 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm9985-201ENSMUST00000044101 510 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Adam17-201ENSMUST00000064536 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm37382-201ENSMUST00000193032 1596 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm18537-202ENSMUST00000206215 1503 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm10388-201ENSMUST00000205001 2936 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm36938-201ENSMUST00000191612 2696 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm26144-201ENSMUST00000104475 132 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm4525-201ENSMUST00000198831 254 ntBASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms