Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm43218-201ENSMUST00000196275 344 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm18988-201ENSMUST00000205601 746 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 AC159819.1-201ENSMUST00000213911 328 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 4930525C09Rik-201ENSMUST00000217919 677 ntTSL 3 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 AC133183.2-201ENSMUST00000221543 280 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 AC154806.1-203ENSMUST00000227370 1032 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 AC164295.2-201ENSMUST00000228539 757 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm6083-201ENSMUST00000075518 357 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Mir365-2-201ENSMUST00000083555 112 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm23102-201ENSMUST00000083724 116 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 AC121860.1-201ENSMUST00000227908 2787 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gng7-202ENSMUST00000099462 3425 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Tmem63c-202ENSMUST00000131878 3311 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Efcab3-201ENSMUST00000021029 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Supt7l-201ENSMUST00000065388 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Pkd2l2-201ENSMUST00000014647 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm38110-201ENSMUST00000194594 1551 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Cass4-203ENSMUST00000109136 2702 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm11690-201ENSMUST00000128183 1856 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Taf12-201ENSMUST00000030731 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Gm38263-201ENSMUST00000195879 3059 ntBASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Slc44a1-202ENSMUST00000107645 2365 ntTSL 5 BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Gm3455-201ENSMUST00000204812 1954 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Zfp658-202ENSMUST00000107972 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC8.21□□□□□ -1.09
Pcdh19Q80TF3 Elovl2-202ENSMUST00000117096 3797 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Ldb2-207ENSMUST00000199534 2541 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm26344-201ENSMUST00000104553 132 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm41-201ENSMUST00000116183 1023 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm13118-201ENSMUST00000120402 549 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm11389-201ENSMUST00000121407 430 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm13676-201ENSMUST00000122185 591 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Defa-ps3-201ENSMUST00000142705 282 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 4833417C18Rik-201ENSMUST00000146868 1269 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm18779-201ENSMUST00000173444 577 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Sdhd-201ENSMUST00000000175 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm18160-201ENSMUST00000214279 827 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm4928-201ENSMUST00000219622 850 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 AL645704.1-201ENSMUST00000221642 604 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 AC192088.2-201ENSMUST00000227590 411 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 AC131033.2-201ENSMUST00000228138 1011 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm45280-201ENSMUST00000210484 2552 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm2447-202ENSMUST00000193813 1815 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Ndrg1-201ENSMUST00000005256 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Phc3-202ENSMUST00000064718 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Pikfyve-202ENSMUST00000097707 6641 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gm38383-201ENSMUST00000194131 2660 ntBASIC8.21□□□□□ -1.1
Pcdh19Q80TF3 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 137.4 ms