Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Arhgef40Q3UPH7 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Arhgef40Q3UPH7 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Arhgef40Q3UPH7 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm24011-201ENSMUST00000157732 268 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm26025-201ENSMUST00000158655 271 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm44356-201ENSMUST00000196731 111 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm42734-201ENSMUST00000201656 878 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm43772-201ENSMUST00000202052 379 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm44258-201ENSMUST00000204925 301 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm45478-201ENSMUST00000209472 211 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 AC108947.1-201ENSMUST00000224274 1000 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm37382-201ENSMUST00000193032 1596 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 AC165260.6-202ENSMUST00000224959 1958 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Ces3a-202ENSMUST00000093223 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm23018-201ENSMUST00000177928 109 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Mir8120-201ENSMUST00000185035 139 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm43846-201ENSMUST00000200502 932 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Gm44856-201ENSMUST00000206639 304 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 AC123920.1-201ENSMUST00000221449 384 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 AC133958.1-201ENSMUST00000227085 961 ntBASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Arhgef40Q3UPH7 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 BC085271-201ENSMUST00000191852 1487 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 AC160637.1-201ENSMUST00000214037 3887 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Gm16016-201ENSMUST00000120831 550 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Gm15538-201ENSMUST00000121410 313 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Mir1983-201ENSMUST00000157523 132 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Gm43196-201ENSMUST00000201762 2114 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Gm18631-201ENSMUST00000223125 1043 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 CT030182.4-201ENSMUST00000223647 645 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Gm22504-201ENSMUST00000082963 139 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Arhgef40Q3UPH7 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms