Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Gm18194-202ENSMUST00000210952 3442 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Gm25842-201ENSMUST00000122590 322 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Gm23533-201ENSMUST00000157540 245 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Scgb2b30-201ENSMUST00000187013 336 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Scgb2b10-201ENSMUST00000191403 318 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 AC122356.2-201ENSMUST00000226962 820 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 AC147096.1-201ENSMUST00000227648 352 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Gm5407-201ENSMUST00000080694 747 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Gm7275-201ENSMUST00000088296 744 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cstf3Q99LI7 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm45737-201ENSMUST00000208344 1612 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 AC166574.1-201ENSMUST00000226916 1309 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Mir704-201ENSMUST00000102106 77 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm23946-201ENSMUST00000104423 197 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm24257-201ENSMUST00000104472 131 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm14056-201ENSMUST00000117198 642 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm14519-201ENSMUST00000118490 312 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm12692-201ENSMUST00000121092 546 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm15989-201ENSMUST00000121895 498 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm12930-201ENSMUST00000146679 676 ntTSL 3 BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm22847-201ENSMUST00000157707 105 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm26505-201ENSMUST00000176208 166 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm43471-201ENSMUST00000197550 467 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm43287-201ENSMUST00000197747 600 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 AC159246.1-201ENSMUST00000214478 249 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 AC123920.1-201ENSMUST00000221449 384 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 AC162940.1-201ENSMUST00000224745 1167 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 CT009711.1-201ENSMUST00000223992 3040 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cstf3Q99LI7 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cstf3Q99LI7 AC125074.1-201ENSMUST00000227970 1331 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms