Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm23079-201ENSMUST00000157847 117 ntBASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm36996-201ENSMUST00000194466 250 ntBASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm42861-201ENSMUST00000199596 634 ntBASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm17909-201ENSMUST00000207587 907 ntBASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 CT009713.5-201ENSMUST00000224508 909 ntBASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm5514-201ENSMUST00000060477 306 ntBASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 AC166574.1-201ENSMUST00000226916 1309 ntBASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm45537-201ENSMUST00000211539 2708 ntBASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm2098-201ENSMUST00000189146 1763 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 n-R5s1-201ENSMUST00000101925 119 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm7803-201ENSMUST00000117176 1015 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm12310-201ENSMUST00000118013 492 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm24647-201ENSMUST00000157112 113 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm24994-201ENSMUST00000157414 121 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm24883-201ENSMUST00000158391 281 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Mir6999-201ENSMUST00000183498 61 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm37977-201ENSMUST00000193096 721 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm38051-201ENSMUST00000193740 433 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm37481-201ENSMUST00000195176 403 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm18243-201ENSMUST00000220756 887 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 AC154747.4-202ENSMUST00000223826 852 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm24143-201ENSMUST00000082633 145 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm43430-201ENSMUST00000196513 3897 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Gm17841-201ENSMUST00000210711 2425 ntBASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nup88Q8CEC0 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 4933415A04Rik-201ENSMUST00000056256 2009 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Gm13407-201ENSMUST00000118256 360 ntBASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Gm13742-201ENSMUST00000118805 457 ntBASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Gm6292-201ENSMUST00000120712 1095 ntBASIC9.19□□□□□ -0.94
Nup88Q8CEC0 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Gm29195-201ENSMUST00000189038 379 ntBASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Gm9289-201ENSMUST00000221269 606 ntBASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC9.19□□□□□ -0.94
Nup88Q8CEC0 AC139569.1-201ENSMUST00000226080 614 ntBASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms