Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 AC131745.3-201ENSMUST00000223582 554 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Tssk4-206ENSMUST00000228041 1217 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm20302-201ENSMUST00000080671 275 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm3203-201ENSMUST00000197670 2389 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Gm15209-201ENSMUST00000117703 400 ntBASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Mir7060-201ENSMUST00000183486 137 ntBASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Gm27468-201ENSMUST00000183577 106 ntBASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Pisrt1-201ENSMUST00000195532 515 ntBASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Gm5609-201ENSMUST00000210008 1267 ntBASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 AC163638.1-201ENSMUST00000224818 392 ntBASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 AC130219.2-201ENSMUST00000228765 807 ntBASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 AC121942.3-201ENSMUST00000225768 1436 ntBASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Dennd6a-205ENSMUST00000224378 2424 ntBASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Gm3742-201ENSMUST00000220907 1391 ntBASIC8.34□□□□□ -1.07
Ccdc87Q8CDL9 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Ccdc87Q8CDL9 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8.34□□□□□ -1.08
Ccdc87Q8CDL9 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Ccdc87Q8CDL9 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
Ccdc87Q8CDL9 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Ccdc87Q8CDL9 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Ccdc87Q8CDL9 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm12817-201ENSMUST00000119622 610 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm25780-201ENSMUST00000122528 253 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm16103-201ENSMUST00000163003 1279 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms