Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm28368-201ENSMUST00000189804 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm29119-201ENSMUST00000189973 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm28716-201ENSMUST00000190217 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm29239-201ENSMUST00000190304 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm28837-201ENSMUST00000190397 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm28968-201ENSMUST00000190413 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm28531-201ENSMUST00000190529 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm28165-201ENSMUST00000190669 694 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm29181-201ENSMUST00000191288 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm38229-201ENSMUST00000191931 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm32347-201ENSMUST00000192944 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm38121-201ENSMUST00000193213 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm38035-201ENSMUST00000194427 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm38350-201ENSMUST00000194789 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm37990-201ENSMUST00000195821 696 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm37200-201ENSMUST00000193689 2172 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm2178-201ENSMUST00000104927 357 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm9428-201ENSMUST00000127214 769 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm5445-201ENSMUST00000180224 480 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm37496-201ENSMUST00000191930 2509 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm45887-201ENSMUST00000212672 2998 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm10623-201ENSMUST00000209081 2639 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Arhgap6-205ENSMUST00000112131 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cdh23Q99PF4 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm12833-201ENSMUST00000136112 477 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Mir378d-201ENSMUST00000184232 110 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm28586-201ENSMUST00000189857 456 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm37439-201ENSMUST00000193150 856 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm37809-201ENSMUST00000195050 931 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm8637-201ENSMUST00000212919 1085 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm4803-201ENSMUST00000218729 1279 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Lcn2-201ENSMUST00000050785 915 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm42981-201ENSMUST00000200184 3252 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm43274-201ENSMUST00000202545 5000 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm11553-201ENSMUST00000120682 240 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm24327-201ENSMUST00000175108 78 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm19088-201ENSMUST00000198800 566 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 AC165260.6-202ENSMUST00000224959 1958 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm8837-201ENSMUST00000161037 1107 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 AC151730.1-201ENSMUST00000226106 448 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Gm45537-201ENSMUST00000211539 2708 ntBASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Nr6a1-201ENSMUST00000076275 5941 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Ttll1-203ENSMUST00000109480 1876 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC7.6□□□□□ -1.19
Cdh23Q99PF4 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Gm13352-201ENSMUST00000117515 262 ntBASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Gm44360-201ENSMUST00000200081 82 ntBASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Speer6-ps1-203ENSMUST00000223482 979 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms