Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC6.74□□□□□ -1.33
Rif1Q6PR54 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.74□□□□□ -1.33
Rif1Q6PR54 AC140406.2-201ENSMUST00000227539 481 ntBASIC6.74□□□□□ -1.33
Rif1Q6PR54 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Atf7-203ENSMUST00000169033 2165 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm43112-201ENSMUST00000196665 3122 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 Ttc21b-201ENSMUST00000102718 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 D230017M19Rik-203ENSMUST00000181973 1649 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Snx25-207ENSMUST00000170416 3067 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Zfp469-202ENSMUST00000187142 3082 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm43657-201ENSMUST00000200336 3833 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Amotl1-206ENSMUST00000223132 3046 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm8159-202ENSMUST00000170546 1759 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm14116-201ENSMUST00000117733 805 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 Fau-ps2-201ENSMUST00000119333 371 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm11198-201ENSMUST00000119771 974 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 n-R5s47-201ENSMUST00000122516 119 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm25372-201ENSMUST00000158161 255 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm24680-201ENSMUST00000158759 126 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 Mir3090-201ENSMUST00000175597 87 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 Slc35a5-205ENSMUST00000181177 865 ntTSL 3 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm7369-201ENSMUST00000192738 936 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm17530-201ENSMUST00000194336 472 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Ddx5-201ENSMUST00000021062 3559 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Mlst8-202ENSMUST00000179163 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Mlst8-201ENSMUST00000070888 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Ccdc162-211ENSMUST00000190522 1810 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Agbl4-206ENSMUST00000106592 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm27166-201ENSMUST00000184476 1930 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm38169-201ENSMUST00000191822 2539 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 Oog4-201ENSMUST00000061277 1981 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm18289-201ENSMUST00000203356 2989 ntBASIC6.73□□□□□ -1.33
Rif1Q6PR54 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.73□□□□□ -1.33
Rif1Q6PR54 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Sat1-202ENSMUST00000112551 896 ntTSL 2 BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Gm8424-201ENSMUST00000117716 988 ntBASIC6.72□□□□□ -1.33
Rif1Q6PR54 Gm13489-201ENSMUST00000121234 971 ntBASIC6.72□□□□□ -1.33
Rif1Q6PR54 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Gm24687-201ENSMUST00000157758 241 ntBASIC6.72□□□□□ -1.33
Rif1Q6PR54 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC6.72□□□□□ -1.33
Rif1Q6PR54 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.72□□□□□ -1.33
Rif1Q6PR54 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.72□□□□□ -1.33
Rif1Q6PR54 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.72□□□□□ -1.33
Rif1Q6PR54 Gm10155-201ENSMUST00000084598 483 ntBASIC6.72□□□□□ -1.33
Rif1Q6PR54 Gm5614-201ENSMUST00000091097 318 ntBASIC6.72□□□□□ -1.33
Rif1Q6PR54 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Clec12b-202ENSMUST00000112082 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Gm38383-201ENSMUST00000194131 2660 ntBASIC6.72□□□□□ -1.33
Rif1Q6PR54 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Gm4784-201ENSMUST00000117365 1824 ntBASIC6.72□□□□□ -1.33
Rif1Q6PR54 Rpgr-204ENSMUST00000115532 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Chrdl2-201ENSMUST00000032977 1520 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rif1Q6PR54 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms