Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Gm26025-201ENSMUST00000158655 271 ntBASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Gm22119-201ENSMUST00000175594 99 ntBASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Mir8120-201ENSMUST00000185035 139 ntBASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Gm37539-201ENSMUST00000192644 235 ntBASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Gm18952-201ENSMUST00000194471 846 ntBASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Gm8275-201ENSMUST00000219732 424 ntBASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 AC124709.1-201ENSMUST00000227296 620 ntBASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Gprc5c-202ENSMUST00000053361 3667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Gm28989-201ENSMUST00000187867 1613 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Gm35608-201ENSMUST00000218472 2370 ntBASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b2Q3UJB0 Clcn3-205ENSMUST00000110302 3768 ntTSL 5 BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Hgd-203ENSMUST00000160847 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Gm11922-201ENSMUST00000118967 475 ntBASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Gm8916-201ENSMUST00000119732 949 ntBASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Gm16016-201ENSMUST00000120831 550 ntBASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Gm19480-201ENSMUST00000185547 667 ntBASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Gm29663-201ENSMUST00000186962 853 ntBASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Gm8407-201ENSMUST00000192719 427 ntBASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Ighv1-83-201ENSMUST00000199643 351 ntBASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 AC153561.1-201ENSMUST00000215943 469 ntBASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Arap1-203ENSMUST00000098243 3693 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Gm43323-201ENSMUST00000202328 4258 ntBASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Ppwd1-201ENSMUST00000022226 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 D830044D21Rik-201ENSMUST00000143315 3897 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Olfr641-202ENSMUST00000213214 2379 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Alox8-201ENSMUST00000021262 3226 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b2Q3UJB0 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC10.27□□□□□ -0.76
Sf3b2Q3UJB0 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sf3b2Q3UJB0 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC10.27□□□□□ -0.76
Sf3b2Q3UJB0 Cpa5-203ENSMUST00000115139 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sf3b2Q3UJB0 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sf3b2Q3UJB0 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sf3b2Q3UJB0 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sf3b2Q3UJB0 Mro-201ENSMUST00000119239 1772 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Pnpla1os-201ENSMUST00000146779 3946 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm45629-201ENSMUST00000209629 2546 ntBASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm13525-201ENSMUST00000120607 478 ntBASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm12949-201ENSMUST00000143382 362 ntTSL 3 BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm23018-201ENSMUST00000177928 109 ntBASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm27373-201ENSMUST00000184017 184 ntBASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm28885-201ENSMUST00000185615 563 ntBASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm27680-202ENSMUST00000199221 807 ntBASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm8539-201ENSMUST00000199822 501 ntBASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm43926-201ENSMUST00000203978 430 ntBASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Lcn2-201ENSMUST00000050785 915 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 St7-201ENSMUST00000000674 1818 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm45767-201ENSMUST00000212778 4561 ntBASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Slc4a2-203ENSMUST00000115049 3924 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Slfn5-202ENSMUST00000108157 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms