Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm25306-201ENSMUST00000175288 117 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Gm22132-201ENSMUST00000175316 100 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Gm6695-201ENSMUST00000177264 1172 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Gm9476-201ENSMUST00000179109 696 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Gm27150-201ENSMUST00000183441 1038 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Gm27228-201ENSMUST00000184500 1038 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Gm28925-201ENSMUST00000188586 168 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Gm38358-201ENSMUST00000195144 428 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Spa17-201ENSMUST00000002013 696 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC8.1□□□□□ -1.11
RxrbP28704 Gm44714-201ENSMUST00000208665 657 ntTSL 3 BASIC8.1□□□□□ -1.11
RxrbP28704 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC8.1□□□□□ -1.11
RxrbP28704 Gm9110-201ENSMUST00000219035 617 ntBASIC8.1□□□□□ -1.11
RxrbP28704 AC134917.3-201ENSMUST00000222057 1283 ntBASIC8.1□□□□□ -1.11
RxrbP28704 AC171241.2-201ENSMUST00000228744 892 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RxrbP28704 Ackr1-201ENSMUST00000038227 1153 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC8.1□□□□□ -1.11
RxrbP28704 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RxrbP28704 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Gm37168-201ENSMUST00000192965 1452 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC8.1□□□□□ -1.11
RxrbP28704 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 Olfr381-203ENSMUST00000214623 2656 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC8.1□□□□□ -1.11
RxrbP28704 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxrbP28704 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.1□□□□□ -1.11
RxrbP28704 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC8.09□□□□□ -1.11
RxrbP28704 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
RxrbP28704 Gimd1-204ENSMUST00000212804 1462 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
RxrbP28704 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
RxrbP28704 Gm23659-201ENSMUST00000102245 110 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Gm27509-201ENSMUST00000102400 79 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
RxrbP28704 Gm14410-201ENSMUST00000108964 912 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC8.09□□□□□ -1.11
RxrbP28704 Gm15933-201ENSMUST00000117215 616 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Gm12959-201ENSMUST00000119396 403 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Olfr621-ps1-201ENSMUST00000119741 938 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RxrbP28704 Lyzl1-202ENSMUST00000120837 652 ntTSL 3 BASIC8.09□□□□□ -1.11
RxrbP28704 Gm13358-201ENSMUST00000121427 569 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Gm15580-201ENSMUST00000121587 556 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC8.09□□□□□ -1.11
RxrbP28704 Gm13546-202ENSMUST00000138444 989 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC8.09□□□□□ -1.11
RxrbP28704 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC8.09□□□□□ -1.11
RxrbP28704 Gm12996-201ENSMUST00000151670 636 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Gm23021-201ENSMUST00000158765 169 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC8.09□□□□□ -1.11
RxrbP28704 Gm4831-201ENSMUST00000174626 594 ntBASIC8.09□□□□□ -1.11
RxrbP28704 1700009J07Rik-201ENSMUST00000178996 912 ntTSL 5 BASIC8.09□□□□□ -1.11
RxrbP28704 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
RxrbP28704 Gm3116-201ENSMUST00000189440 1116 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Gm29068-201ENSMUST00000191607 400 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Gm43235-201ENSMUST00000200121 297 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Gm43906-201ENSMUST00000203194 906 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RxrbP28704 Gm4739-201ENSMUST00000218296 633 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC8.09□□□□□ -1.11
RxrbP28704 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC8.09□□□□□ -1.11
RxrbP28704 AC159293.1-201ENSMUST00000222662 545 ntTSL 3 BASIC8.09□□□□□ -1.11
RxrbP28704 AC165260.2-202ENSMUST00000224998 631 ntBASIC8.09□□□□□ -1.11
RxrbP28704 AC121137.1-201ENSMUST00000225272 602 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Sftpc-201ENSMUST00000022692 792 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Gm5292-201ENSMUST00000073317 580 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Gm24146-201ENSMUST00000082760 321 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Gm42996-201ENSMUST00000196116 1636 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Skap1-201ENSMUST00000071510 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
RxrbP28704 Gm38110-201ENSMUST00000194594 1551 ntBASIC8.09□□□□□ -1.11
RxrbP28704 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RxrbP28704 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms