Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Col1a1P11087 Il6st-209ENSMUST00000184445 1870 ntTSL 5 BASIC9.12□□□□□ -0.95
Col1a1P11087 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Gm7435-202ENSMUST00000216003 2424 ntBASIC9.12□□□□□ -0.95
Col1a1P11087 AC164437.4-202ENSMUST00000228794 2413 ntBASIC9.12□□□□□ -0.95
Col1a1P11087 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Col1a1P11087 Elovl2-202ENSMUST00000117096 3797 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC9.12□□□□□ -0.95
Col1a1P11087 Gm12929-201ENSMUST00000122406 370 ntBASIC9.12□□□□□ -0.95
Col1a1P11087 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC9.12□□□□□ -0.95
Col1a1P11087 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Col1a1P11087 Mir8120-201ENSMUST00000185035 139 ntBASIC9.12□□□□□ -0.95
Col1a1P11087 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC9.12□□□□□ -0.95
Col1a1P11087 Gm43849-201ENSMUST00000201086 215 ntBASIC9.12□□□□□ -0.95
Col1a1P11087 AC123533.2-201ENSMUST00000228176 375 ntBASIC9.12□□□□□ -0.95
Col1a1P11087 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 n-R5s41-201ENSMUST00000083025 119 ntBASIC9.12□□□□□ -0.95
Col1a1P11087 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Gm16072-201ENSMUST00000119574 2377 ntBASIC9.12□□□□□ -0.95
Col1a1P11087 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Luzp4-202ENSMUST00000163338 2025 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Col1a1P11087 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Col1a1P11087 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Gm37649-201ENSMUST00000192079 2232 ntBASIC9.11□□□□□ -0.95
Col1a1P11087 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC9.11□□□□□ -0.95
Col1a1P11087 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 Gm43336-201ENSMUST00000200487 4504 ntBASIC9.11□□□□□ -0.95
Col1a1P11087 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC9.11□□□□□ -0.95
Col1a1P11087 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC9.11□□□□□ -0.95
Col1a1P11087 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC9.11□□□□□ -0.95
Col1a1P11087 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC9.11□□□□□ -0.95
Col1a1P11087 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC9.11□□□□□ -0.95
Col1a1P11087 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC9.11□□□□□ -0.95
Col1a1P11087 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC9.11□□□□□ -0.95
Col1a1P11087 Gm29369-201ENSMUST00000190674 615 ntBASIC9.11□□□□□ -0.95
Col1a1P11087 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Gm38079-201ENSMUST00000195603 154 ntBASIC9.11□□□□□ -0.95
Col1a1P11087 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC9.11□□□□□ -0.95
Col1a1P11087 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC9.11□□□□□ -0.95
Col1a1P11087 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC9.11□□□□□ -0.95
Col1a1P11087 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 Gm44937-201ENSMUST00000207705 2691 ntBASIC9.11□□□□□ -0.95
Col1a1P11087 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Col1a1P11087 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col1a1P11087 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC9.11□□□□□ -0.95
Col1a1P11087 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Col1a1P11087 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Col1a1P11087 Kcnip4-204ENSMUST00000166924 2257 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC9.1□□□□□ -0.95
Col1a1P11087 Gm26419-201ENSMUST00000104272 133 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Col1a1P11087 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Gm23533-201ENSMUST00000157540 245 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC9.1□□□□□ -0.95
Col1a1P11087 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Gm23018-201ENSMUST00000177928 109 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 Gm34701-201ENSMUST00000204213 849 ntBASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 141 ms