Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm43519-201ENSMUST00000197239 1872 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm7134-201ENSMUST00000122296 2406 ntBASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc38Q8CDN8 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm5402-201ENSMUST00000119588 1618 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm13921-201ENSMUST00000119411 463 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm11955-201ENSMUST00000119801 470 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm6798-201ENSMUST00000119961 360 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm13586-201ENSMUST00000121784 464 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm4908-201ENSMUST00000121923 1005 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm7132-201ENSMUST00000182302 984 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Ighv5-1-201ENSMUST00000193324 353 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Trbv9-201ENSMUST00000194494 290 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm43840-201ENSMUST00000199444 484 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm7424-201ENSMUST00000206919 902 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm4178-201ENSMUST00000218307 649 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 1700010B08Rik-201ENSMUST00000073081 899 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Mir146b-201ENSMUST00000093619 109 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm45250-201ENSMUST00000209414 3592 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 AC132384.4-201ENSMUST00000220343 1397 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 AC162467.2-201ENSMUST00000219397 2571 ntBASIC8.81□□□□□ -1
Ccdc38Q8CDN8 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Ccdc38Q8CDN8 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm14519-201ENSMUST00000118490 312 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm12875-201ENSMUST00000118745 344 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm10182-201ENSMUST00000178676 273 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm21013-201ENSMUST00000184952 1201 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm6312-201ENSMUST00000204060 1194 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm3774-201ENSMUST00000209773 435 ntBASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms