Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm43147-201ENSMUST00000196944 542 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm42437-201ENSMUST00000197263 923 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Vmn1r223-201ENSMUST00000091719 1086 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Zcchc12-203ENSMUST00000115257 2051 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Snhg14-206ENSMUST00000187666 2517 ntTSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Pde10a-203ENSMUST00000115708 2471 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Cog4-202ENSMUST00000165867 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm23768-201ENSMUST00000104440 131 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm13196-201ENSMUST00000118297 379 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm13218-201ENSMUST00000128180 265 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm13415-202ENSMUST00000135829 565 ntTSL 3 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm23386-201ENSMUST00000158585 144 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm22701-201ENSMUST00000175371 291 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm23799-201ENSMUST00000175559 120 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Mrgprc7-ps-201ENSMUST00000187169 952 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Bves-201ENSMUST00000095715 4368 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 CT010486.2-201ENSMUST00000224003 2714 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Sec23a-204ENSMUST00000165134 2529 ntTSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Smok3b-201ENSMUST00000100537 2333 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 AC115891.3-201ENSMUST00000219161 2472 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm19589-201ENSMUST00000189394 2623 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm37159-201ENSMUST00000192720 3605 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Wasf1-201ENSMUST00000019975 2609 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 CT010465.1-202ENSMUST00000221816 1355 ntTSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm44437-201ENSMUST00000203832 4038 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Rbm6-ps2-201ENSMUST00000186440 1534 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm11858-201ENSMUST00000117935 838 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm5255-201ENSMUST00000120125 642 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm18821-201ENSMUST00000184135 709 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm8004-201ENSMUST00000187782 617 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm38433-201ENSMUST00000196978 856 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm43762-201ENSMUST00000201521 295 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Olfr1402-201ENSMUST00000060912 963 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Vmn1r210-201ENSMUST00000072044 921 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Rnf38-204ENSMUST00000107836 1694 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm8188-201ENSMUST00000219737 1690 ntBASIC6.76□□□□□ -1.33
Rif1Q6PR54 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Rif1Q6PR54 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Rif1Q6PR54 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC6.75□□□□□ -1.33
Rif1Q6PR54 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC6.75□□□□□ -1.33
Rif1Q6PR54 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Rif1Q6PR54 Gm37447-201ENSMUST00000195625 2928 ntBASIC6.75□□□□□ -1.33
Rif1Q6PR54 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Rif1Q6PR54 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Rif1Q6PR54 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Rif1Q6PR54 Apol11b-204ENSMUST00000181467 1933 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Rif1Q6PR54 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Rif1Q6PR54 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC6.75□□□□□ -1.33
Rif1Q6PR54 Gm37443-201ENSMUST00000193458 2827 ntBASIC6.75□□□□□ -1.33
Rif1Q6PR54 Gprc5c-202ENSMUST00000053361 3667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Rif1Q6PR54 Gm25498-201ENSMUST00000104424 129 ntBASIC6.75□□□□□ -1.33
Rif1Q6PR54 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms