Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm40853-201ENSMUST00000221342 582 ntBASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm9255-201ENSMUST00000223225 581 ntBASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Olfm4-203ENSMUST00000228749 2801 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Synj2-207ENSMUST00000115788 3498 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Slc29a3-202ENSMUST00000119595 3123 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b2Q3UJB0 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 4930428N03Rik-204ENSMUST00000224456 3212 ntBASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Gm16487-201ENSMUST00000105048 4037 ntBASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Thsd1-203ENSMUST00000162447 3273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Gm15533-202ENSMUST00000206216 3262 ntBASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Gm24195-201ENSMUST00000116804 137 ntBASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 AC153961.1-201ENSMUST00000217760 385 ntBASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Apoh-201ENSMUST00000000049 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Gigyf2-205ENSMUST00000172794 4029 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Cd300e-201ENSMUST00000062787 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Fmnl1-203ENSMUST00000107027 3693 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Tbc1d14-221ENSMUST00000171385 3884 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 AC159635.1-201ENSMUST00000220905 2102 ntBASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Gm11342-203ENSMUST00000224879 1324 ntBASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sf3b2Q3UJB0 Hmgcs2-201ENSMUST00000090746 3290 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Gm42638-201ENSMUST00000196065 2587 ntBASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Gm28177-201ENSMUST00000185516 3532 ntTSL 5 BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Tsnaxip1-203ENSMUST00000212566 1993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Gm32335-201ENSMUST00000216896 2948 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Aoc1-203ENSMUST00000162948 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Cd101-201ENSMUST00000147399 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Gm23663-201ENSMUST00000158045 80 ntBASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Gm6838-201ENSMUST00000172851 582 ntBASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Gm12117-201ENSMUST00000183831 456 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Speer6-ps1-203ENSMUST00000223482 979 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 AC122346.1-202ENSMUST00000225586 2116 ntBASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Gm9985-201ENSMUST00000044101 510 ntBASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Cep41-201ENSMUST00000031810 3447 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Flad1-201ENSMUST00000050398 3007 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 CT009530.1-201ENSMUST00000227348 2927 ntBASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Dsg3-201ENSMUST00000070892 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Gm44627-201ENSMUST00000206739 1531 ntBASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Gm43488-201ENSMUST00000198874 2504 ntBASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Olfr554-203ENSMUST00000215995 2515 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Ncaph2-203ENSMUST00000088717 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sf3b2Q3UJB0 Olfr92-203ENSMUST00000216341 2115 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Sf3b2Q3UJB0 Casc1-201ENSMUST00000060797 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b2Q3UJB0 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Sf3b2Q3UJB0 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
Sf3b2Q3UJB0 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b2Q3UJB0 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b2Q3UJB0 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b2Q3UJB0 Thbs3-201ENSMUST00000029682 3190 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b2Q3UJB0 Immt-201ENSMUST00000064062 2728 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b2Q3UJB0 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b2Q3UJB0 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b2Q3UJB0 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sf3b2Q3UJB0 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms