Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gimap1os-201ENSMUST00000155906 1722 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Sgpl1-201ENSMUST00000092498 4070 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC8.51□□□□□ -1.05
Sox1P53783 Fam50a-201ENSMUST00000114160 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Rpp14-201ENSMUST00000023924 2401 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 CT009546.2-201ENSMUST00000223012 3476 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Btnl5-ps-201ENSMUST00000097346 1751 ntBASIC8.51□□□□□ -1.05
Sox1P53783 Sla2-201ENSMUST00000029164 2973 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Baiap3-204ENSMUST00000182435 3758 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Akt2-204ENSMUST00000108343 3122 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Lhx6-202ENSMUST00000112961 3292 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Nuf2-201ENSMUST00000028000 2068 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Adgrl3-213ENSMUST00000120292 5026 ntTSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Gm16407-201ENSMUST00000122134 567 ntBASIC8.51□□□□□ -1.05
Sox1P53783 Gm13676-201ENSMUST00000122185 591 ntBASIC8.51□□□□□ -1.05
Sox1P53783 Gm23888-201ENSMUST00000122690 253 ntBASIC8.51□□□□□ -1.05
Sox1P53783 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.51□□□□□ -1.05
Sox1P53783 Gm12932-201ENSMUST00000143705 620 ntTSL 3 BASIC8.51□□□□□ -1.05
Sox1P53783 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC8.51□□□□□ -1.05
Sox1P53783 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Gm19124-201ENSMUST00000191041 832 ntBASIC8.51□□□□□ -1.05
Sox1P53783 Gm19002-201ENSMUST00000192649 1012 ntBASIC8.51□□□□□ -1.05
Sox1P53783 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.51□□□□□ -1.05
Sox1P53783 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Sox1P53783 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Gm4928-201ENSMUST00000219622 850 ntBASIC8.51□□□□□ -1.05
Sox1P53783 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 AC159242.1-201ENSMUST00000225832 194 ntBASIC8.51□□□□□ -1.05
Sox1P53783 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Trim2-201ENSMUST00000054990 3816 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Gm5619-201ENSMUST00000071172 760 ntBASIC8.51□□□□□ -1.05
Sox1P53783 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Sox1P53783 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Olfr1160-201ENSMUST00000099839 960 ntBASIC8.51□□□□□ -1.05
Sox1P53783 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Olfr411-203ENSMUST00000214769 2545 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Kcnt1-215ENSMUST00000200434 3609 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Mc1r-201ENSMUST00000098324 3638 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Sox1P53783 Prr5l-209ENSMUST00000163762 4159 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Lrrc8d-202ENSMUST00000120847 3929 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Gm4451-201ENSMUST00000186000 1891 ntBASIC8.51□□□□□ -1.05
Sox1P53783 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Arhgap19-202ENSMUST00000163265 5058 ntTSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Gm26601-201ENSMUST00000181427 3551 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Gfm2-209ENSMUST00000161825 4416 ntTSL 2 BASIC8.51□□□□□ -1.05
Sox1P53783 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Sox1P53783 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Sox1P53783 Gm11298-201ENSMUST00000120503 1799 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Gm44998-201ENSMUST00000207091 1768 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Gng7-201ENSMUST00000092285 3362 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Nfatc1-201ENSMUST00000035800 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Arhgef10l-205ENSMUST00000105798 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Gm15328-204ENSMUST00000210330 1518 ntTSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Gm45694-201ENSMUST00000212022 3251 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Eya3-202ENSMUST00000079157 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Txndc16-201ENSMUST00000022377 4028 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Rc3h2-203ENSMUST00000112936 5828 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Smoc1-202ENSMUST00000110347 3496 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Wdr95-201ENSMUST00000110502 2482 ntTSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Gm5754-201ENSMUST00000118774 892 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Gm13858-201ENSMUST00000118862 671 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Gm15696-201ENSMUST00000121730 445 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Gm16159-201ENSMUST00000126122 947 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC8.5□□□□□ -1.05
Sox1P53783 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Gm15251-201ENSMUST00000177947 883 ntBASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms