Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm28864-201ENSMUST00000189251 644 ntBASIC6.42□□□□□ -1.38
Cdx1P18111 Gm42733-201ENSMUST00000201272 519 ntBASIC6.42□□□□□ -1.38
Cdx1P18111 Gm44146-201ENSMUST00000203508 816 ntBASIC6.42□□□□□ -1.38
Cdx1P18111 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC6.42□□□□□ -1.38
Cdx1P18111 Gm44833-201ENSMUST00000208368 331 ntBASIC6.42□□□□□ -1.38
Cdx1P18111 Gm45299-202ENSMUST00000211011 765 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdx1P18111 AC153968.1-201ENSMUST00000215584 334 ntBASIC6.42□□□□□ -1.38
Cdx1P18111 4930477N07Rik-201ENSMUST00000218762 614 ntTSL 5 BASIC6.42□□□□□ -1.38
Cdx1P18111 CT010475.1-201ENSMUST00000224753 526 ntBASIC6.42□□□□□ -1.38
Cdx1P18111 CT025548.2-202ENSMUST00000226598 710 ntBASIC6.42□□□□□ -1.38
Cdx1P18111 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.42□□□□□ -1.38
Cdx1P18111 AC107711.6-201ENSMUST00000228455 1088 ntBASIC6.42□□□□□ -1.38
Cdx1P18111 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 Glt8d2-202ENSMUST00000065815 1240 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cdx1P18111 Akap7-202ENSMUST00000095779 919 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 Olfr444-201ENSMUST00000095955 1050 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cdx1P18111 Defa28-201ENSMUST00000098887 400 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cdx1P18111 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.42□□□□□ -1.38
Cdx1P18111 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Cdx1P18111 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 Gm28453-202ENSMUST00000185975 1337 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 Dixdc1-206ENSMUST00000120622 1379 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.42□□□□□ -1.38
Cdx1P18111 AC154738.6-201ENSMUST00000227225 1352 ntBASIC6.42□□□□□ -1.38
Cdx1P18111 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.42□□□□□ -1.38
Cdx1P18111 C1galt1c1-201ENSMUST00000058265 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cdx1P18111 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC6.41□□□□□ -1.38
Cdx1P18111 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 1700028E10Rik-203ENSMUST00000201142 2310 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Cst10-203ENSMUST00000109939 606 ntTSL 2 BASIC6.41□□□□□ -1.38
Cdx1P18111 Gm8087-201ENSMUST00000119091 567 ntBASIC6.41□□□□□ -1.38
Cdx1P18111 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.41□□□□□ -1.38
Cdx1P18111 Rps14-203ENSMUST00000122279 667 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Gm16008-201ENSMUST00000126009 810 ntTSL 3 BASIC6.41□□□□□ -1.38
Cdx1P18111 Gm25770-201ENSMUST00000158566 115 ntBASIC6.41□□□□□ -1.38
Cdx1P18111 Mir2139-201ENSMUST00000158669 95 ntBASIC6.41□□□□□ -1.38
Cdx1P18111 Sectm1b-207ENSMUST00000170381 1011 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Gm8257-203ENSMUST00000179215 489 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Mir6922-201ENSMUST00000185099 66 ntBASIC6.41□□□□□ -1.38
Cdx1P18111 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Cdx1P18111 Gm37678-201ENSMUST00000192908 1146 ntBASIC6.41□□□□□ -1.38
Cdx1P18111 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC6.41□□□□□ -1.38
Cdx1P18111 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Gm19688-201ENSMUST00000218652 424 ntBASIC6.41□□□□□ -1.38
Cdx1P18111 AC025913.1-202ENSMUST00000220385 824 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 AC134917.3-201ENSMUST00000222057 1283 ntBASIC6.41□□□□□ -1.38
Cdx1P18111 AC124687.4-201ENSMUST00000222361 463 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Tssk4-203ENSMUST00000226497 1235 ntBASIC6.41□□□□□ -1.38
Cdx1P18111 Retnlb-201ENSMUST00000023328 695 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC6.41□□□□□ -1.38
Cdx1P18111 Oard1-201ENSMUST00000046651 1135 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cdx1P18111 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cdx1P18111 Svs3b-201ENSMUST00000063132 1249 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Olfr1382-201ENSMUST00000074543 936 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cdx1P18111 Olfr1371-201ENSMUST00000075844 936 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cdx1P18111 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cdx1P18111 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Nme7-201ENSMUST00000086028 834 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Cdx1P18111 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Gpx5-201ENSMUST00000110491 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 AC102431.2-201ENSMUST00000224071 2448 ntBASIC6.41□□□□□ -1.38
Cdx1P18111 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Gm37675-201ENSMUST00000192303 2847 ntBASIC6.41□□□□□ -1.38
Cdx1P18111 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 AC147250.1-201ENSMUST00000224781 1364 ntBASIC6.41□□□□□ -1.38
Cdx1P18111 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx1P18111 Olfr582-204ENSMUST00000214021 3108 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdx1P18111 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.41□□□□□ -1.38
Cdx1P18111 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms