Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Map4k4-217ENSMUST00000195636 4082 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Col1a1P11087 Lingo2-204ENSMUST00000108124 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 CT010453.1-201ENSMUST00000226795 2201 ntBASIC9.14□□□□□ -0.95
Col1a1P11087 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Crtam-201ENSMUST00000034519 1876 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Col1a1P11087 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Dennd6a-205ENSMUST00000224378 2424 ntBASIC9.14□□□□□ -0.95
Col1a1P11087 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC9.14□□□□□ -0.95
Col1a1P11087 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Col1a1P11087 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC9.14□□□□□ -0.95
Col1a1P11087 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Col1a1P11087 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Col1a1P11087 Gm25760-201ENSMUST00000103989 132 ntBASIC9.14□□□□□ -0.95
Col1a1P11087 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Gm7821-201ENSMUST00000117111 788 ntBASIC9.14□□□□□ -0.95
Col1a1P11087 Gm11880-201ENSMUST00000117612 399 ntBASIC9.14□□□□□ -0.95
Col1a1P11087 Gm11928-201ENSMUST00000119323 437 ntBASIC9.14□□□□□ -0.95
Col1a1P11087 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC9.14□□□□□ -0.95
Col1a1P11087 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC9.14□□□□□ -0.95
Col1a1P11087 Gm27684-201ENSMUST00000183778 80 ntBASIC9.14□□□□□ -0.95
Col1a1P11087 Gm4856-201ENSMUST00000192696 1091 ntBASIC9.14□□□□□ -0.95
Col1a1P11087 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC9.14□□□□□ -0.95
Col1a1P11087 Gm42883-201ENSMUST00000202594 222 ntBASIC9.14□□□□□ -0.95
Col1a1P11087 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 AC151904.5-201ENSMUST00000218975 549 ntBASIC9.14□□□□□ -0.95
Col1a1P11087 AC133958.1-201ENSMUST00000227085 961 ntBASIC9.14□□□□□ -0.95
Col1a1P11087 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC9.14□□□□□ -0.95
Col1a1P11087 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col1a1P11087 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Col1a1P11087 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 C7-201ENSMUST00000110689 2676 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Gm29761-201ENSMUST00000215964 1939 ntBASIC9.13□□□□□ -0.95
Col1a1P11087 Plcg2-201ENSMUST00000081232 4298 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC9.13□□□□□ -0.95
Col1a1P11087 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Col1a1P11087 Gm15578-201ENSMUST00000117320 475 ntBASIC9.13□□□□□ -0.95
Col1a1P11087 Gm6368-201ENSMUST00000119727 2147 ntBASIC9.13□□□□□ -0.95
Col1a1P11087 Gm11188-201ENSMUST00000122382 388 ntBASIC9.13□□□□□ -0.95
Col1a1P11087 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 Mir1983-201ENSMUST00000157523 132 ntBASIC9.13□□□□□ -0.95
Col1a1P11087 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Gm8182-201ENSMUST00000197863 769 ntBASIC9.13□□□□□ -0.95
Col1a1P11087 Gm44760-201ENSMUST00000206375 1173 ntBASIC9.13□□□□□ -0.95
Col1a1P11087 Gm45506-201ENSMUST00000211620 280 ntBASIC9.13□□□□□ -0.95
Col1a1P11087 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC9.13□□□□□ -0.95
Col1a1P11087 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC9.13□□□□□ -0.95
Col1a1P11087 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Col1a1P11087 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC9.13□□□□□ -0.95
Col1a1P11087 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 Gm16121-201ENSMUST00000128520 2253 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Col1a1P11087 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col1a1P11087 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC9.13□□□□□ -0.95
Col1a1P11087 AC131743.4-201ENSMUST00000221638 1553 ntBASIC9.12□□□□□ -0.95
Col1a1P11087 Gm10259-201ENSMUST00000091289 1590 ntBASIC9.12□□□□□ -0.95
Col1a1P11087 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC9.12□□□□□ -0.95
Col1a1P11087 Gm40778-201ENSMUST00000217825 1344 ntBASIC9.12□□□□□ -0.95
Col1a1P11087 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col1a1P11087 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms