Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Gm38099-201ENSMUST00000193280 3170 ntBASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Olfr718-ps1-201ENSMUST00000164536 3962 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Gm12661-201ENSMUST00000118780 3335 ntBASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Gle1-201ENSMUST00000019859 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Gm37633-201ENSMUST00000192858 2700 ntBASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Gm24869-201ENSMUST00000104072 128 ntBASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Pea15b-201ENSMUST00000182806 387 ntBASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Gm37883-201ENSMUST00000194970 725 ntBASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Gm43906-201ENSMUST00000203194 906 ntBASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Gm9652-201ENSMUST00000209345 163 ntBASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 AC118249.1-201ENSMUST00000224822 608 ntBASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Glycam1-204ENSMUST00000228895 641 ntBASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc180J3QNE4 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm26831-201ENSMUST00000181458 1380 ntBASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm10623-201ENSMUST00000209081 2639 ntBASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Coro7-201ENSMUST00000038552 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm4773-201ENSMUST00000120392 702 ntBASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm20396-201ENSMUST00000173358 745 ntBASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm6472-202ENSMUST00000187973 582 ntBASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm38226-201ENSMUST00000192207 521 ntBASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm43287-201ENSMUST00000197747 600 ntBASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm21048-201ENSMUST00000202470 1166 ntBASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm44760-201ENSMUST00000206375 1173 ntBASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm6581-201ENSMUST00000214545 260 ntBASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc180J3QNE4 Gm42595-201ENSMUST00000196771 1607 ntBASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Ralgps2-201ENSMUST00000027886 4237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Gm25631-201ENSMUST00000104390 130 ntBASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Gm26429-201ENSMUST00000104829 110 ntBASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Gm15316-201ENSMUST00000121082 421 ntBASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Gm5135-201ENSMUST00000121100 573 ntBASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Gm28142-201ENSMUST00000186899 698 ntBASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Ndrg3-203ENSMUST00000109558 4023 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Gm36993-201ENSMUST00000192983 2980 ntBASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Gm44228-201ENSMUST00000204888 2026 ntBASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Gm37873-201ENSMUST00000194571 2280 ntBASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Olfr1219-202ENSMUST00000213724 5669 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Nup210l-202ENSMUST00000200410 5710 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc180J3QNE4 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Gm15644-201ENSMUST00000121764 387 ntBASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Gm23139-201ENSMUST00000179454 132 ntBASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Ccdc180J3QNE4 Gm26903-201ENSMUST00000180749 4583 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms