Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 CT030170.6-202ENSMUST00000223186 544 ntBASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 AC154760.1-201ENSMUST00000227218 673 ntBASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Mir24-2-201ENSMUST00000083607 107 ntBASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm43776-201ENSMUST00000199729 2914 ntBASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm38331-201ENSMUST00000195719 2671 ntBASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm44187-201ENSMUST00000204735 1929 ntBASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm28546-201ENSMUST00000188221 615 ntBASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm6123-201ENSMUST00000193658 1069 ntBASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm4977-201ENSMUST00000215709 1262 ntBASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 AC124715.1-201ENSMUST00000228480 754 ntBASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Olfr888-201ENSMUST00000075228 945 ntBASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm37057-201ENSMUST00000192624 1916 ntBASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 AC168056.4-201ENSMUST00000223835 2567 ntBASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm37200-201ENSMUST00000193689 2172 ntBASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ccdc60Q8C4J0 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC9.96□□□□□ -0.81
Ccdc60Q8C4J0 Gm7134-201ENSMUST00000122296 2406 ntBASIC9.96□□□□□ -0.81
Ccdc60Q8C4J0 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccdc60Q8C4J0 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccdc60Q8C4J0 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccdc60Q8C4J0 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccdc60Q8C4J0 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccdc60Q8C4J0 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Gm13680-201ENSMUST00000119790 793 ntBASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Gm43287-201ENSMUST00000197747 600 ntBASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Gm27680-202ENSMUST00000199221 807 ntBASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Gm19254-201ENSMUST00000204828 294 ntBASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Gm45756-201ENSMUST00000212491 407 ntBASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Gm6284-201ENSMUST00000209609 4287 ntBASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccdc60Q8C4J0 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc60Q8C4J0 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms