Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm20128-201ENSMUST00000196189 417 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 Igkv2-116-201ENSMUST00000199327 362 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 Gm4860-201ENSMUST00000200368 454 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 AC130673.1-201ENSMUST00000227992 435 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Gm42638-201ENSMUST00000196065 2587 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 Rabep1-204ENSMUST00000108533 2791 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Olfr411-203ENSMUST00000214769 2545 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Acvr1-204ENSMUST00000112601 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Actr2-201ENSMUST00000000137 3631 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Gm16073-201ENSMUST00000116032 517 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Gm6921-201ENSMUST00000161478 435 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 Gm25301-201ENSMUST00000175285 113 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 Gm27039-201ENSMUST00000182438 962 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 Sbp-207ENSMUST00000183252 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 Sbp-201ENSMUST00000024940 833 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Spink4-201ENSMUST00000030122 397 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Pabpc6-201ENSMUST00000057190 3208 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Ndrg1-201ENSMUST00000005256 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 C1ra-201ENSMUST00000068593 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rif1Q6PR54 Gm44998-201ENSMUST00000207091 1768 ntBASIC6.78□□□□□ -1.32
Rif1Q6PR54 Slc30a6-202ENSMUST00000179074 2171 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Rif1Q6PR54 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Eri2-207ENSMUST00000150844 3564 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Tusc5-201ENSMUST00000062024 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm23701-201ENSMUST00000103893 110 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm14375-201ENSMUST00000119490 855 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm5135-201ENSMUST00000121100 573 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm22529-201ENSMUST00000158817 123 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 2900076A07Rik-203ENSMUST00000180879 725 ntTSL 3 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm18501-201ENSMUST00000185363 664 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm21941-201ENSMUST00000221121 562 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Ghrh-201ENSMUST00000029172 516 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Mcm7-201ENSMUST00000000505 2962 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 AC117656.2-201ENSMUST00000224931 2215 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm10472-201ENSMUST00000193014 2102 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Ttc39c-204ENSMUST00000169401 1950 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Pex5l-205ENSMUST00000108225 3109 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Btnl5-ps-201ENSMUST00000097346 1751 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm31463-201ENSMUST00000208799 1479 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm24709-201ENSMUST00000104123 132 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm23706-201ENSMUST00000104369 82 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm14777-201ENSMUST00000116306 176 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm14727-201ENSMUST00000118526 525 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm14721-201ENSMUST00000121381 525 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Fancb-203ENSMUST00000167446 2953 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm29336-201ENSMUST00000186042 573 ntTSL 2 BASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm28580-201ENSMUST00000186767 88 ntBASIC6.77□□□□□ -1.33
Rif1Q6PR54 Gm43590-201ENSMUST00000195987 387 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms