Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Gm43544-201ENSMUST00000196474 2472 ntBASIC9.29□□□□□ -0.92
Col5a2Q3U962 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Gm14353-201ENSMUST00000122200 869 ntBASIC9.29□□□□□ -0.92
Col5a2Q3U962 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC9.29□□□□□ -0.92
Col5a2Q3U962 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Gm29369-201ENSMUST00000190674 615 ntBASIC9.29□□□□□ -0.92
Col5a2Q3U962 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Gm43772-201ENSMUST00000202052 379 ntBASIC9.29□□□□□ -0.92
Col5a2Q3U962 Gm17834-201ENSMUST00000204322 891 ntBASIC9.29□□□□□ -0.92
Col5a2Q3U962 AC122372.1-201ENSMUST00000215344 280 ntBASIC9.29□□□□□ -0.92
Col5a2Q3U962 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Olfr449-201ENSMUST00000050729 1037 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Gucy1b3-204ENSMUST00000193597 3171 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Rcbtb2-218ENSMUST00000169479 3351 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col5a2Q3U962 Gm3203-201ENSMUST00000197670 2389 ntBASIC9.29□□□□□ -0.92
Col5a2Q3U962 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Gm13545-201ENSMUST00000119044 482 ntBASIC9.28□□□□□ -0.92
Col5a2Q3U962 Gm24157-201ENSMUST00000175265 111 ntBASIC9.28□□□□□ -0.92
Col5a2Q3U962 Gm37383-201ENSMUST00000191750 745 ntBASIC9.28□□□□□ -0.92
Col5a2Q3U962 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC9.28□□□□□ -0.92
Col5a2Q3U962 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 CT010453.2-201ENSMUST00000227005 483 ntBASIC9.28□□□□□ -0.92
Col5a2Q3U962 AC133958.1-201ENSMUST00000227085 961 ntBASIC9.28□□□□□ -0.92
Col5a2Q3U962 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Gm2447-202ENSMUST00000193813 1815 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Gm8049-201ENSMUST00000214336 1782 ntBASIC9.28□□□□□ -0.92
Col5a2Q3U962 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Dgkg-202ENSMUST00000089925 3555 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Gm8004-201ENSMUST00000187782 617 ntBASIC9.28□□□□□ -0.92
Col5a2Q3U962 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Gm7341-201ENSMUST00000192183 926 ntBASIC9.28□□□□□ -0.92
Col5a2Q3U962 Gm42424-201ENSMUST00000198319 376 ntBASIC9.28□□□□□ -0.92
Col5a2Q3U962 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col5a2Q3U962 AC131654.1-201ENSMUST00000219675 745 ntBASIC9.28□□□□□ -0.92
Col5a2Q3U962 AC124397.1-201ENSMUST00000224296 653 ntBASIC9.28□□□□□ -0.92
Col5a2Q3U962 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Col5a2Q3U962 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Col5a2Q3U962 B930095G15Rik-201ENSMUST00000130256 4715 ntTSL 2 BASIC9.27□□□□□ -0.92
Col5a2Q3U962 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Col5a2Q3U962 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col5a2Q3U962 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC9.27□□□□□ -0.93
Col5a2Q3U962 Cacna1c-213ENSMUST00000188078 6519 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Col5a2Q3U962 Cacna1c-217ENSMUST00000188865 6519 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Col5a2Q3U962 Exoc1-203ENSMUST00000113493 3371 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col5a2Q3U962 Gucy2d-203ENSMUST00000206435 3634 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Col5a2Q3U962 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col5a2Q3U962 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col5a2Q3U962 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Col5a2Q3U962 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col5a2Q3U962 Defa-ps7-201ENSMUST00000117139 168 ntBASIC9.27□□□□□ -0.93
Col5a2Q3U962 Gm11880-201ENSMUST00000117612 399 ntBASIC9.27□□□□□ -0.93
Col5a2Q3U962 Gm15538-201ENSMUST00000121410 313 ntBASIC9.27□□□□□ -0.93
Col5a2Q3U962 Gm13221-201ENSMUST00000121712 430 ntBASIC9.27□□□□□ -0.93
Col5a2Q3U962 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC9.27□□□□□ -0.93
Col5a2Q3U962 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC9.27□□□□□ -0.93
Col5a2Q3U962 Gm18808-201ENSMUST00000173316 462 ntBASIC9.27□□□□□ -0.93
Col5a2Q3U962 Gm27373-201ENSMUST00000184017 184 ntBASIC9.27□□□□□ -0.93
Col5a2Q3U962 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC9.27□□□□□ -0.93
Col5a2Q3U962 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC9.27□□□□□ -0.93
Col5a2Q3U962 AC151971.2-201ENSMUST00000217540 909 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms