Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Mir467f-201ENSMUST00000116923 120 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm9392-201ENSMUST00000119337 554 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm8865-201ENSMUST00000125697 430 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm12930-201ENSMUST00000146679 676 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Scgb2b4-ps-201ENSMUST00000186705 340 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm17530-201ENSMUST00000194336 472 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm43743-201ENSMUST00000197898 697 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm42964-201ENSMUST00000202965 382 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm44306-201ENSMUST00000203058 203 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm21941-201ENSMUST00000221121 562 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 AC161374.2-201ENSMUST00000223662 596 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 AC129975.2-201ENSMUST00000223705 775 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 AC159205.7-201ENSMUST00000225988 692 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Nme7-201ENSMUST00000086028 834 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm5614-201ENSMUST00000091097 318 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm6418-201ENSMUST00000118325 3577 ntBASIC8.35□□□□□ -1.07
Trim43aQ3TL54 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm7364-201ENSMUST00000188760 1501 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm25608-201ENSMUST00000104021 132 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm25735-201ENSMUST00000175164 215 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm18828-201ENSMUST00000180475 857 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm43461-201ENSMUST00000202351 996 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm8667-201ENSMUST00000211112 449 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 CT025685.1-201ENSMUST00000213716 150 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 AC155259.1-201ENSMUST00000214794 477 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm7239-201ENSMUST00000220981 860 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm5407-201ENSMUST00000080694 747 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm7275-201ENSMUST00000088296 744 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Gm28497-201ENSMUST00000189646 3029 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim43aQ3TL54 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms