Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim29Q8R2Q0 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Trim29Q8R2Q0 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trim29Q8R2Q0 Gm42576-201ENSMUST00000202336 2846 ntBASIC9.01□□□□□ -0.97
Trim29Q8R2Q0 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim29Q8R2Q0 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim29Q8R2Q0 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim29Q8R2Q0 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim29Q8R2Q0 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim29Q8R2Q0 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim29Q8R2Q0 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC9.01□□□□□ -0.97
Trim29Q8R2Q0 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trim29Q8R2Q0 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim29Q8R2Q0 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Dalir-201ENSMUST00000188773 2170 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Gm13573-201ENSMUST00000116410 631 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 Gm11922-201ENSMUST00000118967 475 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 Gm9392-201ENSMUST00000119337 554 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Gm14830-201ENSMUST00000121899 700 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 Gm6921-201ENSMUST00000161478 435 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Mir7230-201ENSMUST00000195977 56 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 Gm43471-201ENSMUST00000197550 467 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Gm44721-201ENSMUST00000206978 472 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 AC132587.1-201ENSMUST00000220562 166 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 AC163660.3-202ENSMUST00000224917 464 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 AC107663.2-201ENSMUST00000225534 1234 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 AC168056.4-201ENSMUST00000223835 2567 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trim29Q8R2Q0 Gm44752-201ENSMUST00000207140 3305 ntBASIC9□□□□□ -0.97
Trim29Q8R2Q0 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Gm42907-201ENSMUST00000199793 2148 ntBASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Gm26429-201ENSMUST00000104829 110 ntBASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Gm13160-201ENSMUST00000118441 627 ntBASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Gm8802-201ENSMUST00000118633 740 ntBASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Gm5390-201ENSMUST00000119069 1230 ntBASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Gm13683-201ENSMUST00000119497 1076 ntBASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Gm12402-201ENSMUST00000120536 334 ntBASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 Gm6689-201ENSMUST00000130905 481 ntBASIC8.99□□□□□ -0.97
Trim29Q8R2Q0 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms