Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Olfr628-201ENSMUST00000098193 1553 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Gm25273-201ENSMUST00000104295 115 ntBASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Gm4919-201ENSMUST00000117825 604 ntBASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Gm15989-201ENSMUST00000121895 498 ntBASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Gm8065-201ENSMUST00000164048 605 ntBASIC9.29□□□□□ -0.92
Vps53Q8CCB4 1700030O20Rik-201ENSMUST00000185546 594 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Txn-ps1-201ENSMUST00000186385 309 ntBASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Gm20813-201ENSMUST00000186646 705 ntBASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Gm21923-201ENSMUST00000188455 696 ntBASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Gm17199-201ENSMUST00000097296 416 ntBASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Gm37334-201ENSMUST00000192325 2938 ntBASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Ms4a6d-201ENSMUST00000025582 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC9.29□□□□□ -0.92
Vps53Q8CCB4 Gm44797-201ENSMUST00000208780 1837 ntBASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm18908-201ENSMUST00000207125 1483 ntBASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm36993-201ENSMUST00000192983 2980 ntBASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gpr55-201ENSMUST00000086975 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Rars2-201ENSMUST00000029968 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm14186-201ENSMUST00000120804 137 ntBASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm12455-201ENSMUST00000121242 416 ntBASIC9.28□□□□□ -0.92
Vps53Q8CCB4 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm22915-201ENSMUST00000157615 136 ntBASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Aste1-204ENSMUST00000167674 1227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Ighv1-17-201ENSMUST00000194435 350 ntBASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm5981-201ENSMUST00000199912 487 ntBASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm6885-201ENSMUST00000217261 372 ntBASIC9.28□□□□□ -0.92
Vps53Q8CCB4 CT025630.3-201ENSMUST00000228798 835 ntBASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Foxp3-204ENSMUST00000115740 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC9.28□□□□□ -0.92
Vps53Q8CCB4 Gm43686-201ENSMUST00000197351 2439 ntBASIC9.27□□□□□ -0.92
Vps53Q8CCB4 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Vps53Q8CCB4 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Vps53Q8CCB4 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC9.27□□□□□ -0.92
Vps53Q8CCB4 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Vps53Q8CCB4 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms