Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Dync2h1-202ENSMUST00000139115 2892 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Ccdc36-201ENSMUST00000076592 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm22223-201ENSMUST00000157360 125 ntBASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm7481-201ENSMUST00000182020 995 ntBASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm8182-201ENSMUST00000197863 769 ntBASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm7839-201ENSMUST00000210755 673 ntBASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm19161-201ENSMUST00000217958 737 ntBASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Trim2-201ENSMUST00000054990 3816 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm24613-201ENSMUST00000083266 130 ntBASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm16465-201ENSMUST00000118585 1758 ntBASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gimap8-203ENSMUST00000203509 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gatad2b-201ENSMUST00000049382 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Ces2b-201ENSMUST00000059449 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Enox2-203ENSMUST00000114912 3167 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm44752-201ENSMUST00000207140 3305 ntBASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm17083-201ENSMUST00000165849 1366 ntBASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Mcm7-201ENSMUST00000000505 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Pitrm1-207ENSMUST00000222485 3906 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Unc93a-201ENSMUST00000084966 2643 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Gm28653-201ENSMUST00000185494 5276 ntBASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Enox2-205ENSMUST00000114918 3226 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 AC159813.1-201ENSMUST00000222671 2263 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Fignl1-206ENSMUST00000171080 2844 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Rad51d-201ENSMUST00000018985 3426 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Dgkg-202ENSMUST00000089925 3555 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Bcas3-206ENSMUST00000108062 3724 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Prickle2-202ENSMUST00000113445 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Gm26800-201ENSMUST00000180871 349 ntTSL 3 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Gm5539-201ENSMUST00000192177 966 ntBASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Gm4585-201ENSMUST00000207218 452 ntBASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 CT009711.2-202ENSMUST00000224538 973 ntBASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 AC125087.1-201ENSMUST00000227552 514 ntBASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Olfr656-201ENSMUST00000098172 991 ntAPPRIS P2 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Gja1-206ENSMUST00000220069 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Frk-202ENSMUST00000170771 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Bdnf-206ENSMUST00000111046 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Nek10-203ENSMUST00000112631 3386 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Camk2a-201ENSMUST00000025519 3244 ntTSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Ctcflos-204ENSMUST00000153523 3476 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b2Q3UJB0 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm1070-201ENSMUST00000114185 2874 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Phka2-201ENSMUST00000033652 4133 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Pi4kb-203ENSMUST00000125476 3400 ntTSL 5 BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Gm43657-201ENSMUST00000200336 3833 ntBASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sf3b2Q3UJB0 Hmgcr-209ENSMUST00000170287 2981 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 122.5 ms