Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 AC119987.1-201ENSMUST00000212316 848 ntBASIC8.37□□□□□ -1.07
Trim43aQ3TL54 AC132384.1-201ENSMUST00000219908 1195 ntBASIC8.37□□□□□ -1.07
Trim43aQ3TL54 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm32834-202ENSMUST00000222417 655 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 AC154687.1-201ENSMUST00000224875 677 ntBASIC8.37□□□□□ -1.07
Trim43aQ3TL54 AC131100.1-201ENSMUST00000226328 470 ntBASIC8.37□□□□□ -1.07
Trim43aQ3TL54 AC142114.1-201ENSMUST00000227724 328 ntBASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm26264-201ENSMUST00000083278 159 ntBASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Olfr5-201ENSMUST00000086318 1044 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm45210-201ENSMUST00000206401 1577 ntBASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm21043-201ENSMUST00000199316 1517 ntBASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 4930562A09Rik-201ENSMUST00000153818 734 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm16103-201ENSMUST00000163003 1279 ntBASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm26505-201ENSMUST00000176208 166 ntBASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Calm5-201ENSMUST00000183198 589 ntBASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm9729-201ENSMUST00000196364 265 ntBASIC8.36□□□□□ -1.07
Trim43aQ3TL54 AC152946.3-201ENSMUST00000219424 280 ntBASIC8.36□□□□□ -1.07
Trim43aQ3TL54 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 AC125543.2-201ENSMUST00000222114 105 ntBASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm10054-201ENSMUST00000223362 431 ntBASIC8.36□□□□□ -1.07
Trim43aQ3TL54 CT030170.7-201ENSMUST00000223372 103 ntBASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Olfr659-201ENSMUST00000098170 969 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm17027-201ENSMUST00000171202 1403 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Raet1d-202ENSMUST00000182677 1425 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm6284-201ENSMUST00000209609 4287 ntBASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim43aQ3TL54 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Olfr329-ps-201ENSMUST00000108822 1300 ntAPPRIS ALT2 TSL 3 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim43aQ3TL54 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms