Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm43533-201ENSMUST00000202933 2936 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Cdx1P18111 AC164433.1-201ENSMUST00000226138 1544 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx1P18111 Serpina3k-201ENSMUST00000043058 2057 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm19031-201ENSMUST00000176280 1365 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Sdr16c5-201ENSMUST00000040925 1385 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Cdx1P18111 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Cdx1P18111 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Cdx1P18111 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Cdx1P18111 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Clcn3-205ENSMUST00000110302 3768 ntTSL 5 BASIC6.44□□□□□ -1.38
Cdx1P18111 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Ighv1-55-201ENSMUST00000103526 415 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Cdx1P18111 Gm25608-201ENSMUST00000104021 132 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Fam166b-202ENSMUST00000107928 762 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Cdx1P18111 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Gm15355-201ENSMUST00000118929 285 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Gm13161-201ENSMUST00000120609 559 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Gm11243-201ENSMUST00000122335 394 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Gm8865-201ENSMUST00000125697 430 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC6.44□□□□□ -1.38
Cdx1P18111 Bnip1-206ENSMUST00000135824 629 ntTSL 5 BASIC6.44□□□□□ -1.38
Cdx1P18111 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC6.44□□□□□ -1.38
Cdx1P18111 Gm16238-201ENSMUST00000159343 586 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Gm23164-201ENSMUST00000175084 111 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC6.44□□□□□ -1.38
Cdx1P18111 Gm25082-201ENSMUST00000177296 255 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Gm4823-201ENSMUST00000181990 984 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Gm5979-201ENSMUST00000193850 571 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Ighv1-65-201ENSMUST00000198790 349 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Gm29799-201ENSMUST00000204061 487 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Gm9110-201ENSMUST00000219035 617 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 AC152946.3-201ENSMUST00000219424 280 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Gm29807-201ENSMUST00000220161 372 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 4930553J12Rik-201ENSMUST00000023648 381 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Cdx1P18111 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Tmco5-201ENSMUST00000028834 1164 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Gm4858-203ENSMUST00000195847 1451 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Cdx1P18111 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Cdx1P18111 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Cdx1P18111 Zmym5-201ENSMUST00000039812 5290 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
Cdx1P18111 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Gm37222-201ENSMUST00000192806 2961 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Gm2098-201ENSMUST00000189146 1763 ntBASIC6.44□□□□□ -1.38
Cdx1P18111 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdx1P18111 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cdx1P18111 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.43□□□□□ -1.38
Cdx1P18111 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Tpbpa-201ENSMUST00000021885 1621 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.43□□□□□ -1.38
Cdx1P18111 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 AC121942.3-201ENSMUST00000225768 1436 ntBASIC6.43□□□□□ -1.38
Cdx1P18111 Serpini2-201ENSMUST00000039047 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdx1P18111 Gm37168-201ENSMUST00000192965 1452 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdx1P18111 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdx1P18111 Gm42700-201ENSMUST00000199071 2437 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms