Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.71■□□□□ 0.59
H2afb2S4R1M3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
H2afb2S4R1M3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
H2afb2S4R1M3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb2S4R1M3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb2S4R1M3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb2S4R1M3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb2S4R1M3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.7■□□□□ 0.58
H2afb2S4R1M3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb2S4R1M3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb2S4R1M3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.7■□□□□ 0.58
H2afb2S4R1M3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb2S4R1M3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.7■□□□□ 0.58
H2afb2S4R1M3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb2S4R1M3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb2S4R1M3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb2S4R1M3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Gm13146-201ENSMUST00000118508 780 ntBASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb2S4R1M3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Gm13234-201ENSMUST00000120010 747 ntBASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Gm10493-201ENSMUST00000097270 612 ntBASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.68■□□□□ 0.58
H2afb2S4R1M3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.67■□□□□ 0.58
H2afb2S4R1M3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
H2afb2S4R1M3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb2S4R1M3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb2S4R1M3 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.66■□□□□ 0.58
H2afb2S4R1M3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb2S4R1M3 Gm42778-201ENSMUST00000199644 553 ntBASIC18.66■□□□□ 0.58
H2afb2S4R1M3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb2S4R1M3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.66■□□□□ 0.58
H2afb2S4R1M3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb2S4R1M3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.66■□□□□ 0.58
H2afb2S4R1M3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb2S4R1M3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
H2afb2S4R1M3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb2S4R1M3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb2S4R1M3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb2S4R1M3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
H2afb2S4R1M3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb2S4R1M3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb2S4R1M3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb2S4R1M3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb2S4R1M3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb2S4R1M3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb2S4R1M3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb2S4R1M3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb2S4R1M3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
H2afb2S4R1M3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb2S4R1M3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb2S4R1M3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb2S4R1M3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb2S4R1M3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb2S4R1M3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb2S4R1M3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb2S4R1M3 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.64■□□□□ 0.57
H2afb2S4R1M3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb2S4R1M3 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.64■□□□□ 0.57
H2afb2S4R1M3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.64■□□□□ 0.57
H2afb2S4R1M3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.63■□□□□ 0.57
H2afb2S4R1M3 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.63■□□□□ 0.57
H2afb2S4R1M3 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.63■□□□□ 0.57
H2afb2S4R1M3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms