Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cx3cr1Q9Z0D9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cx3cr1Q9Z0D9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.79■□□□□ 0.12
Cx3cr1Q9Z0D9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cr1Q9Z0D9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cr1Q9Z0D9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cr1Q9Z0D9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cr1Q9Z0D9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cr1Q9Z0D9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cr1Q9Z0D9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cr1Q9Z0D9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cr1Q9Z0D9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cr1Q9Z0D9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cx3cr1Q9Z0D9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cx3cr1Q9Z0D9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cx3cr1Q9Z0D9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cx3cr1Q9Z0D9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cx3cr1Q9Z0D9 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.77■□□□□ 0.11
Cx3cr1Q9Z0D9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cx3cr1Q9Z0D9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cx3cr1Q9Z0D9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cx3cr1Q9Z0D9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms