Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col13a1Q9R1N9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Col13a1Q9R1N9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col13a1Q9R1N9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col13a1Q9R1N9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col13a1Q9R1N9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col13a1Q9R1N9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col13a1Q9R1N9 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.83■□□□□ 0.13
Col13a1Q9R1N9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col13a1Q9R1N9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 Gm10819-201ENSMUST00000099988 561 ntBASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.83■□□□□ 0.12
Col13a1Q9R1N9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col13a1Q9R1N9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Gm2559-201ENSMUST00000201323 363 ntBASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col13a1Q9R1N9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col13a1Q9R1N9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Col13a1Q9R1N9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms