Protein–RNA interactions for Protein: Q9R0S3

Mmp17, Matrix metalloproteinase-17, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp17Q9R0S3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Mmp17Q9R0S3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp17Q9R0S3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp17Q9R0S3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp17Q9R0S3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp17Q9R0S3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp17Q9R0S3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp17Q9R0S3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp17Q9R0S3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Mmp17Q9R0S3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Mmp17Q9R0S3 Gm13836-201ENSMUST00000121159 501 ntBASIC17.37■□□□□ 0.37
Mmp17Q9R0S3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.37■□□□□ 0.37
Mmp17Q9R0S3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp17Q9R0S3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp17Q9R0S3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp17Q9R0S3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.36■□□□□ 0.37
Mmp17Q9R0S3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Mmp17Q9R0S3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.36■□□□□ 0.37
Mmp17Q9R0S3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp17Q9R0S3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.36■□□□□ 0.37
Mmp17Q9R0S3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp17Q9R0S3 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.36■□□□□ 0.37
Mmp17Q9R0S3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.36■□□□□ 0.37
Mmp17Q9R0S3 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.36■□□□□ 0.37
Mmp17Q9R0S3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp17Q9R0S3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp17Q9R0S3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp17Q9R0S3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Mmp17Q9R0S3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 Gm11927-201ENSMUST00000118472 759 ntBASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Mmp17Q9R0S3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp17Q9R0S3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp17Q9R0S3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp17Q9R0S3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp17Q9R0S3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp17Q9R0S3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.33■□□□□ 0.37
Mmp17Q9R0S3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp17Q9R0S3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp17Q9R0S3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Mmp17Q9R0S3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.33■□□□□ 0.36
Mmp17Q9R0S3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp17Q9R0S3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp17Q9R0S3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Gm37055-201ENSMUST00000191866 133 ntBASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp17Q9R0S3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp17Q9R0S3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp17Q9R0S3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp17Q9R0S3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp17Q9R0S3 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.31■□□□□ 0.36
Mmp17Q9R0S3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp17Q9R0S3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp17Q9R0S3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp17Q9R0S3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp17Q9R0S3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp17Q9R0S3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp17Q9R0S3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms