Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Phtf1Q9QZ09 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Phtf1Q9QZ09 Golph3-205ENSMUST00000228671 2842 ntBASIC20.56■□□□□ 0.88
Phtf1Q9QZ09 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.56■□□□□ 0.88
Phtf1Q9QZ09 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Phtf1Q9QZ09 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Phtf1Q9QZ09 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Phtf1Q9QZ09 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Phtf1Q9QZ09 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.56■□□□□ 0.88
Phtf1Q9QZ09 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Phtf1Q9QZ09 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Phtf1Q9QZ09 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Phtf1Q9QZ09 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.56■□□□□ 0.88
Phtf1Q9QZ09 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Gm29257-201ENSMUST00000186115 639 ntBASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Phtf1Q9QZ09 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phtf1Q9QZ09 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phtf1Q9QZ09 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.53■□□□□ 0.88
Phtf1Q9QZ09 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.53■□□□□ 0.88
Phtf1Q9QZ09 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Phtf1Q9QZ09 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phtf1Q9QZ09 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phtf1Q9QZ09 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phtf1Q9QZ09 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phtf1Q9QZ09 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Phtf1Q9QZ09 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phtf1Q9QZ09 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phtf1Q9QZ09 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Phtf1Q9QZ09 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phtf1Q9QZ09 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Gm7290-201ENSMUST00000104990 617 ntBASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Gm12918-201ENSMUST00000120234 636 ntBASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Gm15710-201ENSMUST00000121821 636 ntBASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Gm5075-201ENSMUST00000196916 622 ntBASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Phtf1Q9QZ09 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Phtf1Q9QZ09 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Phtf1Q9QZ09 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.51■□□□□ 0.87
Phtf1Q9QZ09 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Phtf1Q9QZ09 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Phtf1Q9QZ09 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Phtf1Q9QZ09 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.51■□□□□ 0.87
Phtf1Q9QZ09 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Phtf1Q9QZ09 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Phtf1Q9QZ09 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Phtf1Q9QZ09 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Phtf1Q9QZ09 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Phtf1Q9QZ09 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Phtf1Q9QZ09 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Phtf1Q9QZ09 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.5■□□□□ 0.87
Phtf1Q9QZ09 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Phtf1Q9QZ09 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Phtf1Q9QZ09 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Phtf1Q9QZ09 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Phtf1Q9QZ09 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
Phtf1Q9QZ09 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Phtf1Q9QZ09 Gm6211-202ENSMUST00000167849 925 ntBASIC20.5■□□□□ 0.87
Phtf1Q9QZ09 Mir5133-201ENSMUST00000174955 77 ntBASIC20.5■□□□□ 0.87
Phtf1Q9QZ09 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Phtf1Q9QZ09 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Phtf1Q9QZ09 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms