Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn5aQ9JJV9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn5aQ9JJV9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.42■□□□□ 0.7
Scn5aQ9JJV9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn5aQ9JJV9 Gm5417-201ENSMUST00000079706 384 ntBASIC19.42■□□□□ 0.7
Scn5aQ9JJV9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn5aQ9JJV9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn5aQ9JJV9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn5aQ9JJV9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn5aQ9JJV9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn5aQ9JJV9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn5aQ9JJV9 Mtag2-201ENSMUST00000058665 714 ntBASIC19.41■□□□□ 0.7
Scn5aQ9JJV9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn5aQ9JJV9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn5aQ9JJV9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scn5aQ9JJV9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.41■□□□□ 0.7
Scn5aQ9JJV9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn5aQ9JJV9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn5aQ9JJV9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.41■□□□□ 0.7
Scn5aQ9JJV9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn5aQ9JJV9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Scn5aQ9JJV9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn5aQ9JJV9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn5aQ9JJV9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn5aQ9JJV9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn5aQ9JJV9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn5aQ9JJV9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn5aQ9JJV9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn5aQ9JJV9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn5aQ9JJV9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Scn5aQ9JJV9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Scn5aQ9JJV9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn5aQ9JJV9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn5aQ9JJV9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.39■□□□□ 0.69
Scn5aQ9JJV9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Scn5aQ9JJV9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn5aQ9JJV9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn5aQ9JJV9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn5aQ9JJV9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Scn5aQ9JJV9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn5aQ9JJV9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn5aQ9JJV9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn5aQ9JJV9 Zfp783-201ENSMUST00000095946 670 ntBASIC19.39■□□□□ 0.69
Scn5aQ9JJV9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn5aQ9JJV9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn5aQ9JJV9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn5aQ9JJV9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn5aQ9JJV9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn5aQ9JJV9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn5aQ9JJV9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.38■□□□□ 0.69
Scn5aQ9JJV9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn5aQ9JJV9 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.38■□□□□ 0.69
Scn5aQ9JJV9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn5aQ9JJV9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Scn5aQ9JJV9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn5aQ9JJV9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Scn5aQ9JJV9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn5aQ9JJV9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn5aQ9JJV9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn5aQ9JJV9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Scn5aQ9JJV9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.36■□□□□ 0.69
Scn5aQ9JJV9 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.36■□□□□ 0.69
Scn5aQ9JJV9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn5aQ9JJV9 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.36■□□□□ 0.69
Scn5aQ9JJV9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn5aQ9JJV9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn5aQ9JJV9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Gm18025-201ENSMUST00000221733 862 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms