Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nup50Q9JIH2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup50Q9JIH2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.76■□□□□ 0.75
Nup50Q9JIH2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup50Q9JIH2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup50Q9JIH2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup50Q9JIH2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup50Q9JIH2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.75■□□□□ 0.75
Nup50Q9JIH2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.75■□□□□ 0.75
Nup50Q9JIH2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.75■□□□□ 0.75
Nup50Q9JIH2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.75■□□□□ 0.75
Nup50Q9JIH2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Gm43060-201ENSMUST00000200621 289 ntBASIC19.74■□□□□ 0.75
Nup50Q9JIH2 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.74■□□□□ 0.75
Nup50Q9JIH2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Nup50Q9JIH2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup50Q9JIH2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup50Q9JIH2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup50Q9JIH2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.73■□□□□ 0.75
Nup50Q9JIH2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup50Q9JIH2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup50Q9JIH2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup50Q9JIH2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.73■□□□□ 0.75
Nup50Q9JIH2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup50Q9JIH2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.73■□□□□ 0.75
Nup50Q9JIH2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nup50Q9JIH2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Grk6-206ENSMUST00000224995 2971 ntBASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup50Q9JIH2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.71■□□□□ 0.75
Nup50Q9JIH2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup50Q9JIH2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.71■□□□□ 0.75
Nup50Q9JIH2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Nup50Q9JIH2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup50Q9JIH2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.71■□□□□ 0.75
Nup50Q9JIH2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup50Q9JIH2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup50Q9JIH2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup50Q9JIH2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Nup50Q9JIH2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup50Q9JIH2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.71■□□□□ 0.75
Nup50Q9JIH2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup50Q9JIH2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup50Q9JIH2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup50Q9JIH2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup50Q9JIH2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup50Q9JIH2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup50Q9JIH2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup50Q9JIH2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup50Q9JIH2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.7■□□□□ 0.74
Nup50Q9JIH2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.7■□□□□ 0.74
Nup50Q9JIH2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup50Q9JIH2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup50Q9JIH2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup50Q9JIH2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup50Q9JIH2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup50Q9JIH2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Nup50Q9JIH2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Nup50Q9JIH2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup50Q9JIH2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup50Q9JIH2 Gm13146-201ENSMUST00000118508 780 ntBASIC19.69■□□□□ 0.74
Nup50Q9JIH2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.69■□□□□ 0.74
Nup50Q9JIH2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup50Q9JIH2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.69■□□□□ 0.74
Nup50Q9JIH2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup50Q9JIH2 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.69■□□□□ 0.74
Nup50Q9JIH2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup50Q9JIH2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms