Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.64■□□□□ 0.57
Vps35Q9EQH3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.64■□□□□ 0.57
Vps35Q9EQH3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps35Q9EQH3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps35Q9EQH3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Vps35Q9EQH3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps35Q9EQH3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps35Q9EQH3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.63■□□□□ 0.57
Vps35Q9EQH3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.63■□□□□ 0.57
Vps35Q9EQH3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.63■□□□□ 0.57
Vps35Q9EQH3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps35Q9EQH3 Gm7514-201ENSMUST00000209475 934 ntBASIC18.63■□□□□ 0.57
Vps35Q9EQH3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.63■□□□□ 0.57
Vps35Q9EQH3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps35Q9EQH3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps35Q9EQH3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vps35Q9EQH3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Vps35Q9EQH3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps35Q9EQH3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps35Q9EQH3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps35Q9EQH3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Vps35Q9EQH3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps35Q9EQH3 Gm7291-201ENSMUST00000199147 382 ntBASIC18.62■□□□□ 0.57
Vps35Q9EQH3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.62■□□□□ 0.57
Vps35Q9EQH3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps35Q9EQH3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
Vps35Q9EQH3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps35Q9EQH3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps35Q9EQH3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps35Q9EQH3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps35Q9EQH3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps35Q9EQH3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps35Q9EQH3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps35Q9EQH3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Vps35Q9EQH3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Vps35Q9EQH3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps35Q9EQH3 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.61■□□□□ 0.57
Vps35Q9EQH3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps35Q9EQH3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps35Q9EQH3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Vps35Q9EQH3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps35Q9EQH3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps35Q9EQH3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps35Q9EQH3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps35Q9EQH3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vps35Q9EQH3 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.59■□□□□ 0.57
Vps35Q9EQH3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps35Q9EQH3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps35Q9EQH3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps35Q9EQH3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps35Q9EQH3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps35Q9EQH3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps35Q9EQH3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps35Q9EQH3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps35Q9EQH3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps35Q9EQH3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps35Q9EQH3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Vps35Q9EQH3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps35Q9EQH3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Vps35Q9EQH3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps35Q9EQH3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps35Q9EQH3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.58■□□□□ 0.56
Vps35Q9EQH3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Vps35Q9EQH3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.58■□□□□ 0.56
Vps35Q9EQH3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps35Q9EQH3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps35Q9EQH3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps35Q9EQH3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps35Q9EQH3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps35Q9EQH3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps35Q9EQH3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps35Q9EQH3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps35Q9EQH3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps35Q9EQH3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Vps35Q9EQH3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.57■□□□□ 0.56
Vps35Q9EQH3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps35Q9EQH3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Vps35Q9EQH3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps35Q9EQH3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps35Q9EQH3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Vps35Q9EQH3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps35Q9EQH3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.57■□□□□ 0.56
Vps35Q9EQH3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps35Q9EQH3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms