Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn3Q9DCB1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn3Q9DCB1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn3Q9DCB1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Hmgn3Q9DCB1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hmgn3Q9DCB1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn3Q9DCB1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn3Q9DCB1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn3Q9DCB1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.53■□□□□ 0.4
Hmgn3Q9DCB1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn3Q9DCB1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn3Q9DCB1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hmgn3Q9DCB1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn3Q9DCB1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn3Q9DCB1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn3Q9DCB1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn3Q9DCB1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn3Q9DCB1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn3Q9DCB1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn3Q9DCB1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn3Q9DCB1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Hmgn3Q9DCB1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Gm40881-201ENSMUST00000223397 166 ntBASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn3Q9DCB1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn3Q9DCB1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn3Q9DCB1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn3Q9DCB1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn3Q9DCB1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hmgn3Q9DCB1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Hmgn3Q9DCB1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn3Q9DCB1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.5■□□□□ 0.39
Hmgn3Q9DCB1 Etf1-202ENSMUST00000180351 108 ntBASIC17.5■□□□□ 0.39
Hmgn3Q9DCB1 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.5■□□□□ 0.39
Hmgn3Q9DCB1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Hmgn3Q9DCB1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn3Q9DCB1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn3Q9DCB1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn3Q9DCB1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Gm8969-201ENSMUST00000199694 526 ntBASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms