Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmg20aQ9DC33 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmg20aQ9DC33 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmg20aQ9DC33 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmg20aQ9DC33 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmg20aQ9DC33 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmg20aQ9DC33 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hmg20aQ9DC33 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmg20aQ9DC33 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmg20aQ9DC33 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hmg20aQ9DC33 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmg20aQ9DC33 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmg20aQ9DC33 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.02■□□□□ 0.32
Hmg20aQ9DC33 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmg20aQ9DC33 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms