Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.35■□□□□ 0.21
Tmem54Q9D7S1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmem54Q9D7S1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmem54Q9D7S1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Tmem54Q9D7S1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tmem54Q9D7S1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmem54Q9D7S1 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.35■□□□□ 0.21
Tmem54Q9D7S1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Tmem54Q9D7S1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Tmem54Q9D7S1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tmem54Q9D7S1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tmem54Q9D7S1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Gm6365-201ENSMUST00000054711 744 ntBASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tmem54Q9D7S1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tmem54Q9D7S1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmem54Q9D7S1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmem54Q9D7S1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms